RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 CDK12Q9NYV4 1490 aaPredicted RBP22.15■■□□□ 1.14
SLC43A1-201ENST00000278426 MSNP26038 577 aaKnown RBP22.15■■□□□ 1.14
SLC43A1-201ENST00000278426 ZNF445P59923 1031 aa22.15■■□□□ 1.14
SLC43A1-201ENST00000278426 DLG5Q8TDM6 1919 aa22.15■■□□□ 1.14
SLC43A1-201ENST00000278426 CHAMP1Q96JM3 812 aa22.14■■□□□ 1.14
SLC43A1-201ENST00000278426 RBM27Q9P2N5 1060 aaKnown RBP22.14■■□□□ 1.13
SLC43A1-201ENST00000278426 CYP2E1P05181 493 aaPredicted RBP22.13■■□□□ 1.13
SLC43A1-201ENST00000278426 TTC22Q5TAA0 569 aa22.13■■□□□ 1.13
SLC43A1-201ENST00000278426 KNDC1Q76NI1 1749 aa22.13■■□□□ 1.13
SLC43A1-201ENST00000278426 SULT6B1Q6IMI4 303 aa22.13■■□□□ 1.13
SLC43A1-201ENST00000278426 USP26Q9BXU7 913 aa22.13■■□□□ 1.13
SLC43A1-201ENST00000278426 A2ML1A8K2U0 1454 aa22.13■■□□□ 1.13
SLC43A1-201ENST00000278426 AATKQ6ZMQ8 1374 aa22.13■■□□□ 1.13
SLC43A1-201ENST00000278426 SMARCA5O60264 1052 aaPredicted RBP22.12■■□□□ 1.13
SLC43A1-201ENST00000278426 ZGPATQ8N5A5 531 aaKnown RBP22.12■■□□□ 1.13
SLC43A1-201ENST00000278426 CPS1P31327 1500 aa22.12■■□□□ 1.13
SLC43A1-201ENST00000278426 INTS3Q68E01 1043 aaKnown RBP22.12■■□□□ 1.13
SLC43A1-201ENST00000278426 MCM10Q7L590 875 aa22.12■■□□□ 1.13
SLC43A1-201ENST00000278426 CCDC61Q9Y6R9 512 aa22.12■■□□□ 1.13
SLC43A1-201ENST00000278426 METP08581 1390 aa22.12■■□□□ 1.13
SLC43A1-201ENST00000278426 DLC1Q96QB1 1528 aa22.11■■□□□ 1.13
SLC43A1-201ENST00000278426 NUCB2P80303 420 aa22.11■■□□□ 1.13
SLC43A1-201ENST00000278426 RBM10P98175 930 aaKnown RBP22.11■■□□□ 1.13
SLC43A1-201ENST00000278426 PRIM1P49642 420 aaKnown RBP22.11■■□□□ 1.13
SLC43A1-201ENST00000278426 PRPF40AO75400 957 aaKnown RBP22.1■■□□□ 1.13
SLC43A1-201ENST00000278426 ANKRD44Q8N8A2 993 aa22.1■■□□□ 1.13
SLC43A1-201ENST00000278426 GPT2Q8TD30 523 aa22.09■■□□□ 1.13
SLC43A1-201ENST00000278426 PDCL3Q9H2J4 239 aa22.09■■□□□ 1.13
SLC43A1-201ENST00000278426 CEP85Q6P2H3 762 aa22.09■■□□□ 1.13
SLC43A1-201ENST00000278426 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.09■■□□□ 1.13
SLC43A1-201ENST00000278426 EIF4A2Q14240 407 aaKnown RBP22.08■■□□□ 1.13
SLC43A1-201ENST00000278426 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.08■■□□□ 1.13
SLC43A1-201ENST00000278426 ZDHHC9Q9Y397 364 aa22.08■■□□□ 1.13
SLC43A1-201ENST00000278426 R3HCC1Q9Y3T6 440 aaKnown RBP22.08■■□□□ 1.13
SLC43A1-201ENST00000278426 SDSP20132 328 aa22.08■■□□□ 1.12
SLC43A1-201ENST00000278426 MEIS3Q99687 375 aa22.08■■□□□ 1.12
SLC43A1-201ENST00000278426 REREQ9P2R6 1566 aa22.08■■□□□ 1.12
SLC43A1-201ENST00000278426 XPCQ01831 940 aaPredicted RBP22.07■■□□□ 1.12
SLC43A1-201ENST00000278426 RIMBP3CA6NJZ7 1639 aa22.07■■□□□ 1.12
SLC43A1-201ENST00000278426 RIMBP3BA6NNM3 1639 aa22.07■■□□□ 1.12
SLC43A1-201ENST00000278426 RIMBP3Q9UFD9 1639 aa22.07■■□□□ 1.12
SLC43A1-201ENST00000278426 KIF24Q5T7B8 1368 aa22.07■■□□□ 1.12
SLC43A1-201ENST00000278426 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
SLC43A1-201ENST00000278426 ATP10DQ9P241 1426 aa22.06■■□□□ 1.12
SLC43A1-201ENST00000278426 NUTM2FA1L443 756 aa22.06■■□□□ 1.12
SLC43A1-201ENST00000278426 RPAP2Q8IXW5 612 aaPredicted RBP22.06■■□□□ 1.12
SLC43A1-201ENST00000278426 CHL1O00533 1208 aa22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 SOX12O15370 315 aa22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 FOXD4L5Q5VV16 416 aaPredicted RBP22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 FOXD4L4Q8WXT5 416 aaPredicted RBP22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 PDLIM2Q96JY6 352 aa22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 NSFL1CQ9UNZ2 370 aaKnown RBP22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 MSH6P52701 1360 aa22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 RGS12O14924 1447 aa22.05■■□□□ 1.12
SLC43A1-201ENST00000278426 NOL7Q9UMY1 257 aaKnown RBP22.04■■□□□ 1.12
SLC43A1-201ENST00000278426 PRR36Q9H6K5 1346 aa22.04■■□□□ 1.12
SLC43A1-201ENST00000278426 SETD1AO15047 1707 aaKnown RBP22.04■■□□□ 1.12
SLC43A1-201ENST00000278426 SLC4A2P04920 1241 aa22.03■■□□□ 1.12
SLC43A1-201ENST00000278426 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
SLC43A1-201ENST00000278426 FAM69CQ0P6D2 419 aa22.03■■□□□ 1.12
SLC43A1-201ENST00000278426 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
SLC43A1-201ENST00000278426 TMEM63CQ9P1W3 806 aa22.03■■□□□ 1.12
SLC43A1-201ENST00000278426 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
SLC43A1-201ENST00000278426 SYCE3A1L190 88 aa22.01■■□□□ 1.11
SLC43A1-201ENST00000278426 HS1BP3Q53T59 392 aa22.01■■□□□ 1.11
SLC43A1-201ENST00000278426 CWC22Q9HCG8 908 aaKnown RBP22.01■■□□□ 1.11
SLC43A1-201ENST00000278426 SLC4A10Q6U841 1118 aa22.01■■□□□ 1.11
SLC43A1-201ENST00000278426 ST18O60284 1047 aa22■■□□□ 1.11
SLC43A1-201ENST00000278426 FAM13BQ9NYF5 915 aa22■■□□□ 1.11
SLC43A1-201ENST00000278426 F6X3S4 739 aa22■■□□□ 1.11
SLC43A1-201ENST00000278426 ZNF500O60304 480 aaPredicted RBP22■■□□□ 1.11
SLC43A1-201ENST00000278426 CASC1Q6TDU7 716 aa22■■□□□ 1.11
SLC43A1-201ENST00000278426 HAP1P54257 671 aaPredicted RBP21.99■■□□□ 1.11
SLC43A1-201ENST00000278426 G2E3Q7L622 706 aa21.99■■□□□ 1.11
SLC43A1-201ENST00000278426 FOXO3O43524 673 aa21.98■■□□□ 1.11
SLC43A1-201ENST00000278426 PTPRCP08575 1304 aa21.98■■□□□ 1.11
SLC43A1-201ENST00000278426 LRSAM1Q6UWE0 723 aa21.97■■□□□ 1.11
SLC43A1-201ENST00000278426 ZKSCAN5Q9Y2L8 839 aa21.97■■□□□ 1.11
SLC43A1-201ENST00000278426 TTC21BQ7Z4L5 1316 aa21.97■■□□□ 1.11
SLC43A1-201ENST00000278426 TERF1P54274 439 aa21.97■■□□□ 1.11
SLC43A1-201ENST00000278426 RNF214Q8ND24 703 aa21.97■■□□□ 1.11
SLC43A1-201ENST00000278426 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
SLC43A1-201ENST00000278426 NRXN3Q9Y4C0 1643 aa21.97■■□□□ 1.11
SLC43A1-201ENST00000278426 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
SLC43A1-201ENST00000278426 KIAA0232Q92628 1395 aa21.96■■□□□ 1.11
SLC43A1-201ENST00000278426 UQCRHLA0A096LP55 91 aa21.96■■□□□ 1.11
SLC43A1-201ENST00000278426 UQCRHP07919 91 aa21.96■■□□□ 1.11
SLC43A1-201ENST00000278426 TSHZ3Q63HK5 1081 aa21.96■■□□□ 1.11
SLC43A1-201ENST00000278426 MON2Q7Z3U7 1717 aa21.96■■□□□ 1.11
SLC43A1-201ENST00000278426 ACEP12821 1306 aa21.96■■□□□ 1.11
SLC43A1-201ENST00000278426 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
SLC43A1-201ENST00000278426 REC8O95072 547 aa21.95■■□□□ 1.1
SLC43A1-201ENST00000278426 ERC2O15083 957 aa21.94■■□□□ 1.1
SLC43A1-201ENST00000278426 C3P01024 1663 aa21.94■■□□□ 1.1
SLC43A1-201ENST00000278426 EXOC6BQ9Y2D4 811 aa21.94■■□□□ 1.1
SLC43A1-201ENST00000278426 PDE1AP54750 535 aa21.93■■□□□ 1.1
SLC43A1-201ENST00000278426 TSPYL4Q9UJ04 414 aa21.93■■□□□ 1.1
SLC43A1-201ENST00000278426 HMMRO75330 724 aa21.93■■□□□ 1.1
SLC43A1-201ENST00000278426 NEK4P51957 841 aa21.92■■□□□ 1.1
SLC43A1-201ENST00000278426 ARID3AQ99856 593 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms