RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 ANKRD44Q8N8A2 993 aa29.29■■■□□ 2.28
RETREG2-201ENST00000273048 ATP10DQ9P241 1426 aa29.28■■■□□ 2.28
RETREG2-201ENST00000273048 ZNF445P59923 1031 aa29.27■■■□□ 2.28
RETREG2-201ENST00000273048 MLECQ14165 292 aa29.27■■■□□ 2.28
RETREG2-201ENST00000273048 GLIPR1L2Q4G1C9 344 aa29.27■■■□□ 2.28
RETREG2-201ENST00000273048 CEP85Q6P2H3 762 aa29.26■■■□□ 2.27
RETREG2-201ENST00000273048 CHAMP1Q96JM3 812 aa29.26■■■□□ 2.27
RETREG2-201ENST00000273048 CDK12Q9NYV4 1490 aaPredicted RBP29.26■■■□□ 2.27
RETREG2-201ENST00000273048 KIF24Q5T7B8 1368 aa29.25■■■□□ 2.27
RETREG2-201ENST00000273048 KIAA1211Q6ZU35 1233 aa29.25■■■□□ 2.27
RETREG2-201ENST00000273048 DIP2BQ9P265 1576 aa29.24■■■□□ 2.27
RETREG2-201ENST00000273048 RBSNQ9H1K0 784 aa29.24■■■□□ 2.27
RETREG2-201ENST00000273048 NCKAP5LQ9HCH0 1330 aa29.24■■■□□ 2.27
RETREG2-201ENST00000273048 PRPF40AO75400 957 aaKnown RBP29.24■■■□□ 2.27
RETREG2-201ENST00000273048 RBM27Q9P2N5 1060 aaKnown RBP29.24■■■□□ 2.27
RETREG2-201ENST00000273048 RGS12O14924 1447 aa29.23■■■□□ 2.27
RETREG2-201ENST00000273048 ZDHHC9Q9Y397 364 aa29.23■■■□□ 2.27
RETREG2-201ENST00000273048 MSH6P52701 1360 aa29.22■■■□□ 2.27
RETREG2-201ENST00000273048 MEIS3Q99687 375 aa29.22■■■□□ 2.27
RETREG2-201ENST00000273048 EDC4Q6P2E9 1401 aaKnown RBP29.21■■■□□ 2.27
RETREG2-201ENST00000273048 ST18O60284 1047 aa29.21■■■□□ 2.27
RETREG2-201ENST00000273048 MSNP26038 577 aaKnown RBP29.21■■■□□ 2.27
RETREG2-201ENST00000273048 PRIM1P49642 420 aaKnown RBP29.21■■■□□ 2.27
RETREG2-201ENST00000273048 AEBP1Q8IUX7 1158 aa29.21■■■□□ 2.27
RETREG2-201ENST00000273048 RPAP2Q8IXW5 612 aaPredicted RBP29.21■■■□□ 2.27
RETREG2-201ENST00000273048 GPT2Q8TD30 523 aa29.21■■■□□ 2.27
RETREG2-201ENST00000273048 TPM2P07951 284 aa29.21■■■□□ 2.27
RETREG2-201ENST00000273048 CASC1Q6TDU7 716 aa29.2■■■□□ 2.27
RETREG2-201ENST00000273048 COG3Q96JB2 828 aa29.2■■■□□ 2.27
RETREG2-201ENST00000273048 CPSF1Q10570 1443 aaKnown RBP29.2■■■□□ 2.26
RETREG2-201ENST00000273048 VSIG10Q8N0Z9 540 aa29.2■■■□□ 2.26
RETREG2-201ENST00000273048 CWC22Q9HCG8 908 aaKnown RBP29.2■■■□□ 2.26
RETREG2-201ENST00000273048 RTL1A6NKG5 1358 aa29.19■■■□□ 2.26
RETREG2-201ENST00000273048 FOXD4L5Q5VV16 416 aaPredicted RBP29.18■■■□□ 2.26
RETREG2-201ENST00000273048 FOXD4L4Q8WXT5 416 aaPredicted RBP29.18■■■□□ 2.26
RETREG2-201ENST00000273048 MCM10Q7L590 875 aa29.18■■■□□ 2.26
RETREG2-201ENST00000273048 AATKQ6ZMQ8 1374 aa29.18■■■□□ 2.26
RETREG2-201ENST00000273048 A2ML1A8K2U0 1454 aa29.16■■■□□ 2.26
RETREG2-201ENST00000273048 WASLO00401 505 aaPredicted RBP29.16■■■□□ 2.26
RETREG2-201ENST00000273048 CPS1P31327 1500 aa29.16■■■□□ 2.26
RETREG2-201ENST00000273048 OFD1O75665 1012 aa29.16■■■□□ 2.26
RETREG2-201ENST00000273048 REC8O95072 547 aa29.15■■■□□ 2.26
RETREG2-201ENST00000273048 NSFL1CQ9UNZ2 370 aaKnown RBP29.15■■■□□ 2.26
RETREG2-201ENST00000273048 SULT6B1Q6IMI4 303 aa29.14■■■□□ 2.26
RETREG2-201ENST00000273048 ERC2O15083 957 aa29.13■■■□□ 2.25
RETREG2-201ENST00000273048 DLC1Q96QB1 1528 aa29.13■■■□□ 2.25
RETREG2-201ENST00000273048 TMEM63CQ9P1W3 806 aa29.13■■■□□ 2.25
RETREG2-201ENST00000273048 CHL1O00533 1208 aa29.12■■■□□ 2.25
RETREG2-201ENST00000273048 NUDT16Q96DE0 195 aaKnown RBP29.12■■■□□ 2.25
RETREG2-201ENST00000273048 TSHZ3Q63HK5 1081 aa29.11■■■□□ 2.25
RETREG2-201ENST00000273048 PDLIM2Q96JY6 352 aa29.11■■■□□ 2.25
RETREG2-201ENST00000273048 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.11■■■□□ 2.25
RETREG2-201ENST00000273048 SYCE3A1L190 88 aa29.1■■■□□ 2.25
RETREG2-201ENST00000273048 EIF4A2Q14240 407 aaKnown RBP29.1■■■□□ 2.25
RETREG2-201ENST00000273048 TXNDC2Q86VQ3 553 aa29.1■■■□□ 2.25
RETREG2-201ENST00000273048 SLC4A2P04920 1241 aa29.09■■■□□ 2.25
RETREG2-201ENST00000273048 NEK4P51957 841 aa29.09■■■□□ 2.25
RETREG2-201ENST00000273048 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.09■■■□□ 2.25
RETREG2-201ENST00000273048 MIS18AQ9NYP9 233 aa29.09■■■□□ 2.25
RETREG2-201ENST00000273048 AGLP35573 1532 aa29.08■■■□□ 2.25
RETREG2-201ENST00000273048 NOL7Q9UMY1 257 aaKnown RBP29.08■■■□□ 2.25
RETREG2-201ENST00000273048 SPATA31D1Q6ZQQ2 1576 aa29.08■■■□□ 2.25
RETREG2-201ENST00000273048 SETD1AO15047 1707 aaKnown RBP29.08■■■□□ 2.25
RETREG2-201ENST00000273048 PTPRCP08575 1304 aa29.08■■■□□ 2.25
RETREG2-201ENST00000273048 SLC4A10Q6U841 1118 aa29.08■■■□□ 2.24
RETREG2-201ENST00000273048 F6X3S4 739 aa29.07■■■□□ 2.24
RETREG2-201ENST00000273048 PDE1AP54750 535 aa29.07■■■□□ 2.24
RETREG2-201ENST00000273048 XPCQ01831 940 aaPredicted RBP29.06■■■□□ 2.24
RETREG2-201ENST00000273048 HS1BP3Q53T59 392 aa29.06■■■□□ 2.24
RETREG2-201ENST00000273048 TMX3Q96JJ7 454 aa29.06■■■□□ 2.24
RETREG2-201ENST00000273048 ZMYND15Q9H091 742 aa29.06■■■□□ 2.24
RETREG2-201ENST00000273048 R3HCC1Q9Y3T6 440 aaKnown RBP29.06■■■□□ 2.24
RETREG2-201ENST00000273048 LRSAM1Q6UWE0 723 aa29.05■■■□□ 2.24
RETREG2-201ENST00000273048 HAP1P54257 671 aaPredicted RBP29.05■■■□□ 2.24
RETREG2-201ENST00000273048 G2E3Q7L622 706 aa29.05■■■□□ 2.24
RETREG2-201ENST00000273048 NOL8Q76FK4 1167 aaKnown RBP29.04■■■□□ 2.24
RETREG2-201ENST00000273048 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.04■■■□□ 2.24
RETREG2-201ENST00000273048 CCDC61Q9Y6R9 512 aa29.04■■■□□ 2.24
RETREG2-201ENST00000273048 KIAA0232Q92628 1395 aa29.03■■■□□ 2.24
RETREG2-201ENST00000273048 EXOC6BQ9Y2D4 811 aa29.03■■■□□ 2.24
RETREG2-201ENST00000273048 HMMRO75330 724 aa29.02■■■□□ 2.24
RETREG2-201ENST00000273048 RBM10P98175 930 aaKnown RBP29.02■■■□□ 2.24
RETREG2-201ENST00000273048 METP08581 1390 aa29.02■■■□□ 2.24
RETREG2-201ENST00000273048 RNF214Q8ND24 703 aa29.02■■■□□ 2.24
RETREG2-201ENST00000273048 PPP6R1Q9UPN7 881 aa29.02■■■□□ 2.24
RETREG2-201ENST00000273048 OSBPL3Q9H4L5 887 aa29.01■■■□□ 2.24
RETREG2-201ENST00000273048 PALD1Q9ULE6 856 aa29.01■■■□□ 2.24
RETREG2-201ENST00000273048 ZNF500O60304 480 aaPredicted RBP29■■■□□ 2.23
RETREG2-201ENST00000273048 PDCL3Q9H2J4 239 aa29■■■□□ 2.23
RETREG2-201ENST00000273048 NRXN3Q9Y4C0 1643 aa29■■■□□ 2.23
RETREG2-201ENST00000273048 MON2Q7Z3U7 1717 aa28.99■■■□□ 2.23
RETREG2-201ENST00000273048 ZKSCAN5Q9Y2L8 839 aa28.98■■■□□ 2.23
RETREG2-201ENST00000273048 HSP90AB2PQ58FF8 381 aa28.98■■■□□ 2.23
RETREG2-201ENST00000273048 ESYT1Q9BSJ8 1104 aa28.98■■■□□ 2.23
RETREG2-201ENST00000273048 PRR36Q9H6K5 1346 aa28.97■■■□□ 2.23
RETREG2-201ENST00000273048 FOXO3O43524 673 aa28.97■■■□□ 2.23
RETREG2-201ENST00000273048 BRD1O95696 1058 aa28.97■■■□□ 2.23
RETREG2-201ENST00000273048 FOXD4L6Q3SYB3 417 aaPredicted RBP28.97■■■□□ 2.23
RETREG2-201ENST00000273048 FOXD4L3Q6VB84 417 aaPredicted RBP28.97■■■□□ 2.23
RETREG2-201ENST00000273048 PKNOX2Q96KN3 472 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms