RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 FOXO3O43524 673 aa29.92■■■□□ 2.38
SH3GL1-201ENST00000269886 L1TD1Q5T7N2 865 aaKnown RBP29.92■■■□□ 2.38
SH3GL1-201ENST00000269886 HAP1P54257 671 aaPredicted RBP29.92■■■□□ 2.38
SH3GL1-201ENST00000269886 KIAA0232Q92628 1395 aa29.92■■■□□ 2.38
SH3GL1-201ENST00000269886 MSH6P52701 1360 aa29.91■■■□□ 2.38
SH3GL1-201ENST00000269886 PLEKHG1Q9ULL1 1385 aa29.91■■■□□ 2.38
SH3GL1-201ENST00000269886 FOXD4L1Q9NU39 408 aa29.91■■■□□ 2.38
SH3GL1-201ENST00000269886 USP31Q70CQ4 1352 aa29.91■■■□□ 2.38
SH3GL1-201ENST00000269886 PTPRUQ92729 1446 aa29.9■■■□□ 2.38
SH3GL1-201ENST00000269886 CEP85Q6P2H3 762 aa29.9■■■□□ 2.38
SH3GL1-201ENST00000269886 OTUD7AQ8TE49 926 aaPredicted RBP29.9■■■□□ 2.38
SH3GL1-201ENST00000269886 MAP3K19Q56UN5 1328 aa29.9■■■□□ 2.38
SH3GL1-201ENST00000269886 CEBPAP49715 358 aaPredicted RBP29.89■■■□□ 2.38
SH3GL1-201ENST00000269886 MEIS3Q99687 375 aa29.89■■■□□ 2.38
SH3GL1-201ENST00000269886 CRB1P82279 1406 aa29.89■■■□□ 2.38
SH3GL1-201ENST00000269886 SLC4A2P04920 1241 aa29.89■■■□□ 2.38
SH3GL1-201ENST00000269886 RGPD1P0DJD0 1748 aa29.89■■■□□ 2.38
SH3GL1-201ENST00000269886 TNPO1Q92973 898 aaKnown RBP29.88■■■□□ 2.37
SH3GL1-201ENST00000269886 NALCNQ8IZF0 1738 aa29.88■■■□□ 2.37
SH3GL1-201ENST00000269886 APBB1O00213 710 aa29.88■■■□□ 2.37
SH3GL1-201ENST00000269886 TTC22Q5TAA0 569 aa29.88■■■□□ 2.37
SH3GL1-201ENST00000269886 RPAP2Q8IXW5 612 aaPredicted RBP29.88■■■□□ 2.37
SH3GL1-201ENST00000269886 RTL1A6NKG5 1358 aa29.87■■■□□ 2.37
SH3GL1-201ENST00000269886 MTHFSDQ2M296 383 aaKnown RBP29.87■■■□□ 2.37
SH3GL1-201ENST00000269886 SSH2Q76I76 1423 aa29.87■■■□□ 2.37
SH3GL1-201ENST00000269886 PTPRCP08575 1304 aa29.87■■■□□ 2.37
SH3GL1-201ENST00000269886 GOLGA6L3A6NEY3 463 aa29.86■■■□□ 2.37
SH3GL1-201ENST00000269886 HSP90AA1P07900 732 aaKnown RBP29.86■■■□□ 2.37
SH3GL1-201ENST00000269886 DDX11L8A8MPP1 907 aa29.86■■■□□ 2.37
SH3GL1-201ENST00000269886 K7ELQ4 463 aaPredicted RBP29.86■■■□□ 2.37
SH3GL1-201ENST00000269886 SMARCA5O60264 1052 aaPredicted RBP29.86■■■□□ 2.37
SH3GL1-201ENST00000269886 FSD2A1L4K1 749 aa29.85■■■□□ 2.37
SH3GL1-201ENST00000269886 AMOTL2Q9Y2J4 779 aa29.85■■■□□ 2.37
SH3GL1-201ENST00000269886 XRCC6P12956 609 aaKnown RBP eCLIP29.84■■■□□ 2.37
SH3GL1-201ENST00000269886 CIZ1Q9ULV3 898 aaPredicted RBP29.84■■■□□ 2.37
SH3GL1-201ENST00000269886 G2E3Q7L622 706 aa29.83■■■□□ 2.37
SH3GL1-201ENST00000269886 TSPYL4Q9UJ04 414 aa29.83■■■□□ 2.37
SH3GL1-201ENST00000269886 RIMS1Q86UR5 1692 aaKnown RBP29.83■■■□□ 2.37
SH3GL1-201ENST00000269886 ARHGEF10O15013 1369 aa29.83■■■□□ 2.37
SH3GL1-201ENST00000269886 RTF1Q92541 710 aaKnown RBP29.82■■■□□ 2.36
SH3GL1-201ENST00000269886 RAB3GAP1Q15042 981 aa29.82■■■□□ 2.36
SH3GL1-201ENST00000269886 PLPPR3Q6T4P5 718 aa29.81■■■□□ 2.36
SH3GL1-201ENST00000269886 ANO8Q9HCE9 1232 aaPredicted RBP29.81■■■□□ 2.36
SH3GL1-201ENST00000269886 F6X3S4 739 aa29.81■■■□□ 2.36
SH3GL1-201ENST00000269886 SLC4A10Q6U841 1118 aa29.8■■■□□ 2.36
SH3GL1-201ENST00000269886 NGDNQ8NEJ9 315 aaKnown RBP29.8■■■□□ 2.36
SH3GL1-201ENST00000269886 GAS2L2Q8NHY3 880 aa29.8■■■□□ 2.36
SH3GL1-201ENST00000269886 FAM43AQ8N2R8 423 aa29.8■■■□□ 2.36
SH3GL1-201ENST00000269886 EID1Q9Y6B2 187 aa29.8■■■□□ 2.36
SH3GL1-201ENST00000269886 TTC21AQ8NDW8 1320 aa29.8■■■□□ 2.36
SH3GL1-201ENST00000269886 EYA1Q99502 592 aa29.79■■■□□ 2.36
SH3GL1-201ENST00000269886 FLT4P35916 1363 aa29.78■■■□□ 2.36
SH3GL1-201ENST00000269886 SDSP20132 328 aa29.78■■■□□ 2.36
SH3GL1-201ENST00000269886 SBNO1A3KN83 1393 aa29.78■■■□□ 2.36
SH3GL1-201ENST00000269886 AMPHP49418 695 aa29.78■■■□□ 2.36
SH3GL1-201ENST00000269886 PANK2Q9BZ23 570 aa29.78■■■□□ 2.36
SH3GL1-201ENST00000269886 USP26Q9BXU7 913 aa29.76■■■□□ 2.35
SH3GL1-201ENST00000269886 GBP4Q96PP9 640 aa29.76■■■□□ 2.35
SH3GL1-201ENST00000269886 CEP170BQ9Y4F5 1589 aaPredicted RBP29.75■■■□□ 2.35
SH3GL1-201ENST00000269886 KDRP35968 1356 aa29.75■■■□□ 2.35
SH3GL1-201ENST00000269886 FMN2Q9NZ56 1722 aa29.75■■■□□ 2.35
SH3GL1-201ENST00000269886 IGSF1Q8N6C5 1336 aa29.73■■■□□ 2.35
SH3GL1-201ENST00000269886 RGPD8O14715 1765 aaPredicted RBP29.72■■■□□ 2.35
SH3GL1-201ENST00000269886 RABEP1Q15276 862 aa29.72■■■□□ 2.35
SH3GL1-201ENST00000269886 SSFA2P28290 1259 aa29.71■■■□□ 2.35
SH3GL1-201ENST00000269886 NUTM2GQ5VZR2 741 aa29.71■■■□□ 2.35
SH3GL1-201ENST00000269886 TBX22Q9Y458 520 aa29.71■■■□□ 2.35
SH3GL1-201ENST00000269886 CCT4P50991 539 aaKnown RBP29.7■■■□□ 2.35
SH3GL1-201ENST00000269886 HMMRO75330 724 aa29.7■■■□□ 2.34
SH3GL1-201ENST00000269886 NLRP6P59044 892 aa29.7■■■□□ 2.34
SH3GL1-201ENST00000269886 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.7■■■□□ 2.34
SH3GL1-201ENST00000269886 EIF5BO60841 1220 aaKnown RBP29.69■■■□□ 2.34
SH3GL1-201ENST00000269886 DIP2AQ14689 1571 aa29.68■■■□□ 2.34
SH3GL1-201ENST00000269886 DNAJC5Q9H3Z4 198 aa29.68■■■□□ 2.34
SH3GL1-201ENST00000269886 NECTIN2Q92692 538 aa29.68■■■□□ 2.34
SH3GL1-201ENST00000269886 CASC1Q6TDU7 716 aa29.67■■■□□ 2.34
SH3GL1-201ENST00000269886 STK31Q9BXU1 1019 aa29.67■■■□□ 2.34
SH3GL1-201ENST00000269886 PIK3C2AO00443 1686 aa29.67■■■□□ 2.34
SH3GL1-201ENST00000269886 MRE11P49959 708 aa29.66■■■□□ 2.34
SH3GL1-201ENST00000269886 RRAGDQ9NQL2 400 aaPredicted RBP29.66■■■□□ 2.34
SH3GL1-201ENST00000269886 EXOC6BQ9Y2D4 811 aa29.65■■■□□ 2.34
SH3GL1-201ENST00000269886 GNAI2P04899 355 aa29.64■■■□□ 2.34
SH3GL1-201ENST00000269886 GRPEL1Q9HAV7 217 aa29.64■■■□□ 2.34
SH3GL1-201ENST00000269886 PDE1AP54750 535 aa29.64■■■□□ 2.33
SH3GL1-201ENST00000269886 SLIT1O75093 1534 aa29.63■■■□□ 2.33
SH3GL1-201ENST00000269886 GNAT3A8MTJ3 354 aa29.63■■■□□ 2.33
SH3GL1-201ENST00000269886 FLIIQ13045 1269 aa29.63■■■□□ 2.33
SH3GL1-201ENST00000269886 FKBP5Q13451 457 aaPredicted RBP29.63■■■□□ 2.33
SH3GL1-201ENST00000269886 ARHGAP23Q9P227 1491 aa29.63■■■□□ 2.33
SH3GL1-201ENST00000269886 HOXC9P31274 260 aa29.62■■■□□ 2.33
SH3GL1-201ENST00000269886 TSHZ3Q63HK5 1081 aa29.62■■■□□ 2.33
SH3GL1-201ENST00000269886 LTV1Q96GA3 475 aaPredicted RBP29.62■■■□□ 2.33
SH3GL1-201ENST00000269886 SKOR2Q2VWA4 1001 aaPredicted RBP29.61■■■□□ 2.33
SH3GL1-201ENST00000269886 GAS2L3Q86XJ1 694 aa29.61■■■□□ 2.33
SH3GL1-201ENST00000269886 OSBPL3Q9H4L5 887 aa29.61■■■□□ 2.33
SH3GL1-201ENST00000269886 HTATSF1O43719 755 aaKnown RBP29.6■■■□□ 2.33
SH3GL1-201ENST00000269886 CCDC30Q5VVM6 783 aa29.6■■■□□ 2.33
SH3GL1-201ENST00000269886 IL17REQ8NFR9 667 aa29.6■■■□□ 2.33
SH3GL1-201ENST00000269886 FER1L4A9Z1Z3 1794 aa29.59■■■□□ 2.33
SH3GL1-201ENST00000269886 AK9Q5TCS8 1911 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms