RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 BECN2A8MW95 431 aa16.5■□□□□ 0.23
NPC1-201ENST00000269228 NUCB2P80303 420 aa16.5■□□□□ 0.23
NPC1-201ENST00000269228 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
NPC1-201ENST00000269228 KCNA6P17658 529 aa16.5■□□□□ 0.23
NPC1-201ENST00000269228 FMNL2Q96PY5 1086 aa16.49■□□□□ 0.23
NPC1-201ENST00000269228 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
NPC1-201ENST00000269228 TOM1O60784 492 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 ZPR1O75312 459 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 IGHMBP2P38935 993 aaKnown RBP16.48■□□□□ 0.23
NPC1-201ENST00000269228 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
NPC1-201ENST00000269228 ZNF652Q9Y2D9 606 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 IKQ13123 557 aaPredicted RBP16.48■□□□□ 0.23
NPC1-201ENST00000269228 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
NPC1-201ENST00000269228 ATP10AO60312 1499 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
NPC1-201ENST00000269228 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
NPC1-201ENST00000269228 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
NPC1-201ENST00000269228 ATP7AQ04656 1500 aa16.47■□□□□ 0.23
NPC1-201ENST00000269228 DNAAF4Q8WXU2 420 aa16.47■□□□□ 0.23
NPC1-201ENST00000269228 DNMT1P26358 1616 aaKnown RBP16.47■□□□□ 0.23
NPC1-201ENST00000269228 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
NPC1-201ENST00000269228 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
NPC1-201ENST00000269228 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.46■□□□□ 0.23
NPC1-201ENST00000269228 TESK2Q96S53 571 aa16.46■□□□□ 0.23
NPC1-201ENST00000269228 MBIPQ9NS73 344 aa16.46■□□□□ 0.23
NPC1-201ENST00000269228 ZBTB3Q9H5J0 574 aa16.45■□□□□ 0.22
NPC1-201ENST00000269228 FLIIQ13045 1269 aa16.45■□□□□ 0.22
NPC1-201ENST00000269228 HYPKQ9NX55 129 aa16.45■□□□□ 0.22
NPC1-201ENST00000269228 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
NPC1-201ENST00000269228 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
NPC1-201ENST00000269228 NACAP1Q9BZK3 213 aa16.45■□□□□ 0.22
NPC1-201ENST00000269228 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
NPC1-201ENST00000269228 RABEP1Q15276 862 aa16.44■□□□□ 0.22
NPC1-201ENST00000269228 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
NPC1-201ENST00000269228 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
NPC1-201ENST00000269228 PZPP20742 1482 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 ASXL1Q8IXJ9 1541 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 XBP1P17861 261 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 CWC27Q6UX04 472 aaKnown RBP16.43■□□□□ 0.22
NPC1-201ENST00000269228 RAI14Q9P0K7 980 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 ZSCAN25Q6NSZ9 544 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
NPC1-201ENST00000269228 GPTP24298 496 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
NPC1-201ENST00000269228 RBM5P52756 815 aaKnown RBP eCLIP16.42■□□□□ 0.22
NPC1-201ENST00000269228 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
NPC1-201ENST00000269228 BRMS1Q9HCU9 246 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
NPC1-201ENST00000269228 TRIM27P14373 513 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 LRRFIP2Q9Y608 721 aaKnown RBP16.42■□□□□ 0.22
NPC1-201ENST00000269228 A0A087WZG4 1122 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 ATP2B1P20020 1258 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
NPC1-201ENST00000269228 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 YTHDC2Q9H6S0 1430 aaKnown RBP16.42■□□□□ 0.22
NPC1-201ENST00000269228 LRP2BPQ9P2M1 347 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 ANXA1P04083 346 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
NPC1-201ENST00000269228 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
NPC1-201ENST00000269228 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
NPC1-201ENST00000269228 LRRC59Q96AG4 307 aaKnown RBP16.41■□□□□ 0.22
NPC1-201ENST00000269228 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
NPC1-201ENST00000269228 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
NPC1-201ENST00000269228 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
NPC1-201ENST00000269228 MCM2P49736 904 aa16.4■□□□□ 0.22
NPC1-201ENST00000269228 CCDC43Q96MW1 224 aaKnown RBP16.4■□□□□ 0.22
NPC1-201ENST00000269228 HOOK1Q9UJC3 728 aaKnown RBP16.4■□□□□ 0.22
NPC1-201ENST00000269228 MAP3K2Q9Y2U5 619 aa16.4■□□□□ 0.22
NPC1-201ENST00000269228 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
NPC1-201ENST00000269228 IFIT5Q13325 482 aaKnown RBP16.4■□□□□ 0.22
NPC1-201ENST00000269228 ABCC1P33527 1531 aa16.39■□□□□ 0.22
NPC1-201ENST00000269228 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 STK3Q13188 491 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 NPATQ14207 1427 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
NPC1-201ENST00000269228 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
NPC1-201ENST00000269228 GSE1Q14687 1217 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 PI4KAP2A4QPH2 592 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 TPM2P07951 284 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
NPC1-201ENST00000269228 MX1P20591 662 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
NPC1-201ENST00000269228 PI4KAP1Q8N8J0 262 aa16.39■□□□□ 0.21
NPC1-201ENST00000269228 PTPRCP08575 1304 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 TPM3P06753 285 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 C8orf37Q96NL8 207 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 RAB11FIP3O75154 756 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 GCP02774 474 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 TDO2P48775 406 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 AKAP2Q9Y2D5 859 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 PDE4CQ08493 712 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms