RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 KRT28Q7Z3Y7 464 aa19.95■□□□□ 0.78
MAP1LC3B-201ENST00000268607 TPM2P07951 284 aa19.94■□□□□ 0.78
MAP1LC3B-201ENST00000268607 PRDM4Q9UKN5 801 aa19.94■□□□□ 0.78
MAP1LC3B-201ENST00000268607 OVOS2A0A0J9YW53 1432 aa19.94■□□□□ 0.78
MAP1LC3B-201ENST00000268607 OVOS2Q6IE36 1432 aa19.94■□□□□ 0.78
MAP1LC3B-201ENST00000268607 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
MAP1LC3B-201ENST00000268607 MFAP1P55081 439 aaKnown RBP19.94■□□□□ 0.78
MAP1LC3B-201ENST00000268607 FTSJ3Q8IY81 847 aaKnown RBP19.94■□□□□ 0.78
MAP1LC3B-201ENST00000268607 C22orf23Q9BZE7 217 aa19.93■□□□□ 0.78
MAP1LC3B-201ENST00000268607 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
MAP1LC3B-201ENST00000268607 C1orf167Q5SNV9 1468 aa19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 SULT6B1Q6IMI4 303 aa19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 NRKQ7Z2Y5 1582 aa19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 TTC21AQ8NDW8 1320 aa19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 CALD1Q05682 793 aaKnown RBP19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 USHBP1Q8N6Y0 703 aa19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 TRIM44Q96DX7 344 aaPredicted RBP19.92■□□□□ 0.78
MAP1LC3B-201ENST00000268607 ELL2O00472 640 aaPredicted RBP19.91■□□□□ 0.78
MAP1LC3B-201ENST00000268607 DZIP1LQ8IYY4 767 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-201ENST00000268607 NOB1Q9ULX3 412 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-201ENST00000268607 PIK3C2AO00443 1686 aa19.91■□□□□ 0.78
MAP1LC3B-201ENST00000268607 LRRC7Q96NW7 1537 aa19.91■□□□□ 0.78
MAP1LC3B-201ENST00000268607 TRIM27P14373 513 aa19.9■□□□□ 0.78
MAP1LC3B-201ENST00000268607 ZC3H6P61129 1189 aaKnown RBP19.9■□□□□ 0.78
MAP1LC3B-201ENST00000268607 RWDD1Q9H446 243 aaPredicted RBP19.9■□□□□ 0.78
MAP1LC3B-201ENST00000268607 NWD1Q149M9 1564 aa19.9■□□□□ 0.78
MAP1LC3B-201ENST00000268607 DCTN1Q14203 1278 aa19.89■□□□□ 0.78
MAP1LC3B-201ENST00000268607 FAM83GA6ND36 823 aa19.89■□□□□ 0.77
MAP1LC3B-201ENST00000268607 KIAA1211Q6ZU35 1233 aa19.89■□□□□ 0.77
MAP1LC3B-201ENST00000268607 MVPQ14764 893 aaKnown RBP19.89■□□□□ 0.77
MAP1LC3B-201ENST00000268607 NFE2L2Q16236 605 aa19.89■□□□□ 0.77
MAP1LC3B-201ENST00000268607 MSH6P52701 1360 aa19.88■□□□□ 0.77
MAP1LC3B-201ENST00000268607 DDX11L8A8MPP1 907 aa19.88■□□□□ 0.77
MAP1LC3B-201ENST00000268607 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
MAP1LC3B-201ENST00000268607 ITPRIPQ8IWB1 547 aa19.88■□□□□ 0.77
MAP1LC3B-201ENST00000268607 AATKQ6ZMQ8 1374 aa19.88■□□□□ 0.77
MAP1LC3B-201ENST00000268607 MST1RQ04912 1400 aa19.87■□□□□ 0.77
MAP1LC3B-201ENST00000268607 IL16Q14005 1332 aa19.86■□□□□ 0.77
MAP1LC3B-201ENST00000268607 GAS2L3Q86XJ1 694 aa19.86■□□□□ 0.77
MAP1LC3B-201ENST00000268607 HSCBQ8IWL3 235 aa19.86■□□□□ 0.77
MAP1LC3B-201ENST00000268607 AAMPQ13685 434 aa19.86■□□□□ 0.77
MAP1LC3B-201ENST00000268607 SLAIN2Q9P270 581 aa19.86■□□□□ 0.77
MAP1LC3B-201ENST00000268607 PEAK1Q9H792 1746 aa19.86■□□□□ 0.77
MAP1LC3B-201ENST00000268607 GCP02774 474 aa19.85■□□□□ 0.77
MAP1LC3B-201ENST00000268607 ATF7IPQ6VMQ6 1270 aa19.85■□□□□ 0.77
MAP1LC3B-201ENST00000268607 BRINP3Q76B58 766 aa19.85■□□□□ 0.77
MAP1LC3B-201ENST00000268607 TSPYL6Q8N831 410 aa19.85■□□□□ 0.77
MAP1LC3B-201ENST00000268607 USP31Q70CQ4 1352 aa19.85■□□□□ 0.77
MAP1LC3B-201ENST00000268607 HOXC9P31274 260 aa19.85■□□□□ 0.77
MAP1LC3B-201ENST00000268607 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-201ENST00000268607 LRRC59Q96AG4 307 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3B-201ENST00000268607 EYA1Q99502 592 aa19.84■□□□□ 0.77
MAP1LC3B-201ENST00000268607 TMEM57Q8N5G2 664 aa19.83■□□□□ 0.77
MAP1LC3B-201ENST00000268607 CHRNA2Q15822 529 aa19.82■□□□□ 0.76
MAP1LC3B-201ENST00000268607 ISY1Q9ULR0 285 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3B-201ENST00000268607 AXIN2Q9Y2T1 843 aa19.82■□□□□ 0.76
MAP1LC3B-201ENST00000268607 CDK12Q9NYV4 1490 aaPredicted RBP19.81■□□□□ 0.76
MAP1LC3B-201ENST00000268607 XIRP1Q702N8 1843 aaKnown RBP19.81■□□□□ 0.76
MAP1LC3B-201ENST00000268607 TNPO1Q92973 898 aaKnown RBP19.81■□□□□ 0.76
MAP1LC3B-201ENST00000268607 MBIPQ9NS73 344 aa19.8■□□□□ 0.76
MAP1LC3B-201ENST00000268607 DDIT3P35638 169 aa19.79■□□□□ 0.76
MAP1LC3B-201ENST00000268607 FLT4P35916 1363 aa19.78■□□□□ 0.76
MAP1LC3B-201ENST00000268607 VAMP4O75379 141 aa19.78■□□□□ 0.76
MAP1LC3B-201ENST00000268607 MCM10Q7L590 875 aa19.78■□□□□ 0.76
MAP1LC3B-201ENST00000268607 FAM13BQ9NYF5 915 aa19.78■□□□□ 0.76
MAP1LC3B-201ENST00000268607 SBNO1A3KN83 1393 aa19.77■□□□□ 0.76
MAP1LC3B-201ENST00000268607 C8orf58Q8NAV2 365 aa19.77■□□□□ 0.76
MAP1LC3B-201ENST00000268607 MARF1Q9Y4F3 1742 aaKnown RBP19.77■□□□□ 0.75
MAP1LC3B-201ENST00000268607 GNAI1P63096 354 aa19.77■□□□□ 0.75
MAP1LC3B-201ENST00000268607 NBPF6Q5VWK0 638 aa19.77■□□□□ 0.75
MAP1LC3B-201ENST00000268607 NBPF4Q96M43 638 aa19.77■□□□□ 0.75
MAP1LC3B-201ENST00000268607 DDX19BQ9UMR2 479 aa19.77■□□□□ 0.75
MAP1LC3B-201ENST00000268607 MIS18AQ9NYP9 233 aa19.76■□□□□ 0.75
MAP1LC3B-201ENST00000268607 NCOA3Q9Y6Q9 1424 aa19.75■□□□□ 0.75
MAP1LC3B-201ENST00000268607 IPO8O15397 1037 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-201ENST00000268607 KRT24Q2M2I5 525 aa19.75■□□□□ 0.75
MAP1LC3B-201ENST00000268607 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
MAP1LC3B-201ENST00000268607 NPHP3Q7Z494 1330 aa19.74■□□□□ 0.75
MAP1LC3B-201ENST00000268607 KIF16BQ96L93 1317 aa19.74■□□□□ 0.75
MAP1LC3B-201ENST00000268607 TWISTNBQ3B726 338 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-201ENST00000268607 ALDH1L2Q3SY69 923 aa19.74■□□□□ 0.75
MAP1LC3B-201ENST00000268607 GBP4Q96PP9 640 aa19.74■□□□□ 0.75
MAP1LC3B-201ENST00000268607 FOXD4L1Q9NU39 408 aa19.74■□□□□ 0.75
MAP1LC3B-201ENST00000268607 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
MAP1LC3B-201ENST00000268607 MTHFSDQ2M296 383 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-201ENST00000268607 OFD1O75665 1012 aa19.73■□□□□ 0.75
MAP1LC3B-201ENST00000268607 HSP90AB1P08238 724 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-201ENST00000268607 CFAP44Q96MT7 982 aa19.73■□□□□ 0.75
MAP1LC3B-201ENST00000268607 ARID3AQ99856 593 aa19.73■□□□□ 0.75
MAP1LC3B-201ENST00000268607 PIP4K2BP78356 416 aa19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 ARHGEF25Q86VW2 580 aa19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 C1orf115Q9H7X2 142 aa19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 ZBTB40Q9NUA8 1239 aa19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 RAB3GAP1Q15042 981 aa19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 SMC5Q8IY18 1101 aa19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 MRPL50Q8N5N7 158 aaKnown RBP19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 IP6K1Q92551 441 aa19.72■□□□□ 0.75
MAP1LC3B-201ENST00000268607 FGD1P98174 961 aa19.71■□□□□ 0.75
MAP1LC3B-201ENST00000268607 KCNH5Q8NCM2 988 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms