RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 DIP2AQ14689 1571 aa12.9□□□□□ -0.34
LSG1-201ENST00000265245 CHL1O00533 1208 aa12.9□□□□□ -0.34
LSG1-201ENST00000265245 MCM10Q7L590 875 aa12.9□□□□□ -0.34
LSG1-201ENST00000265245 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
LSG1-201ENST00000265245 PDE4CQ08493 712 aa12.89□□□□□ -0.35
LSG1-201ENST00000265245 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
LSG1-201ENST00000265245 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 MAP3K19Q56UN5 1328 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
LSG1-201ENST00000265245 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 TOPAZ1Q8N9V7 1692 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 KIAA0232Q92628 1395 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 ARHGEF10O15013 1369 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 FLT4P35916 1363 aa12.88□□□□□ -0.35
LSG1-201ENST00000265245 SIRT2Q8IXJ6 389 aa12.87□□□□□ -0.35
LSG1-201ENST00000265245 AMPHP49418 695 aa12.87□□□□□ -0.35
LSG1-201ENST00000265245 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
LSG1-201ENST00000265245 HSCBQ8IWL3 235 aa12.87□□□□□ -0.35
LSG1-201ENST00000265245 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
LSG1-201ENST00000265245 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
LSG1-201ENST00000265245 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
LSG1-201ENST00000265245 PTPRCP08575 1304 aa12.86□□□□□ -0.35
LSG1-201ENST00000265245 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
LSG1-201ENST00000265245 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
LSG1-201ENST00000265245 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
LSG1-201ENST00000265245 XRN1Q8IZH2 1706 aaKnown RBP12.84□□□□□ -0.35
LSG1-201ENST00000265245 TSPYL4Q9UJ04 414 aa12.84□□□□□ -0.35
LSG1-201ENST00000265245 NLRP6P59044 892 aa12.84□□□□□ -0.35
LSG1-201ENST00000265245 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
LSG1-201ENST00000265245 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
LSG1-201ENST00000265245 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
LSG1-201ENST00000265245 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
LSG1-201ENST00000265245 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.36
LSG1-201ENST00000265245 CRB1P82279 1406 aa12.83□□□□□ -0.36
LSG1-201ENST00000265245 KDRP35968 1356 aa12.83□□□□□ -0.36
LSG1-201ENST00000265245 PEAK1Q9H792 1746 aa12.83□□□□□ -0.36
LSG1-201ENST00000265245 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 NWD1Q149M9 1564 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 FOXO3O43524 673 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 EYA1Q99502 592 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
LSG1-201ENST00000265245 RBM10P98175 930 aaKnown RBP12.82□□□□□ -0.36
LSG1-201ENST00000265245 GLIPR1L2Q4G1C9 344 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
LSG1-201ENST00000265245 CDC45O75419 566 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 MIS18AQ9NYP9 233 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 RGS12O14924 1447 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 ANKARQ7Z5J8 1434 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 SNX21Q969T3 373 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 ARXQ96QS3 562 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 RGPD1P0DJD0 1748 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 KCNA6P17658 529 aa12.81□□□□□ -0.36
LSG1-201ENST00000265245 MSH6P52701 1360 aa12.8□□□□□ -0.36
LSG1-201ENST00000265245 CEP85Q6P2H3 762 aa12.8□□□□□ -0.36
LSG1-201ENST00000265245 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
LSG1-201ENST00000265245 STK31Q9BXU1 1019 aa12.8□□□□□ -0.36
LSG1-201ENST00000265245 HMMRO75330 724 aa12.79□□□□□ -0.36
LSG1-201ENST00000265245 PLEKHM2Q8IWE5 1019 aa12.79□□□□□ -0.36
LSG1-201ENST00000265245 MEIS3Q99687 375 aa12.79□□□□□ -0.36
LSG1-201ENST00000265245 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
LSG1-201ENST00000265245 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
LSG1-201ENST00000265245 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
LSG1-201ENST00000265245 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
LSG1-201ENST00000265245 SLC4A10Q6U841 1118 aa12.79□□□□□ -0.36
LSG1-201ENST00000265245 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
LSG1-201ENST00000265245 HOXC9P31274 260 aa12.78□□□□□ -0.36
LSG1-201ENST00000265245 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
LSG1-201ENST00000265245 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
LSG1-201ENST00000265245 MCM4P33991 863 aa12.78□□□□□ -0.36
LSG1-201ENST00000265245 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.36
LSG1-201ENST00000265245 TTC22Q5TAA0 569 aa12.77□□□□□ -0.36
LSG1-201ENST00000265245 C14orf37Q86TY3 774 aa12.77□□□□□ -0.37
LSG1-201ENST00000265245 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
LSG1-201ENST00000265245 CCDC30Q5VVM6 783 aa12.76□□□□□ -0.37
LSG1-201ENST00000265245 STRCP1A6NGW2 1772 aa12.76□□□□□ -0.37
LSG1-201ENST00000265245 APBB1O00213 710 aa12.76□□□□□ -0.37
LSG1-201ENST00000265245 CASC1Q6TDU7 716 aa12.76□□□□□ -0.37
LSG1-201ENST00000265245 F6X3S4 739 aa12.75□□□□□ -0.37
LSG1-201ENST00000265245 G2E3Q7L622 706 aa12.75□□□□□ -0.37
LSG1-201ENST00000265245 LTV1Q96GA3 475 aaPredicted RBP12.75□□□□□ -0.37
LSG1-201ENST00000265245 PIK3C2AO00443 1686 aa12.75□□□□□ -0.37
LSG1-201ENST00000265245 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
LSG1-201ENST00000265245 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
LSG1-201ENST00000265245 C16orf71Q8IYS4 520 aaPredicted RBP12.75□□□□□ -0.37
LSG1-201ENST00000265245 KIF2CQ99661 725 aa12.75□□□□□ -0.37
LSG1-201ENST00000265245 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
LSG1-201ENST00000265245 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
LSG1-201ENST00000265245 GNAI2P04899 355 aa12.74□□□□□ -0.37
LSG1-201ENST00000265245 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
LSG1-201ENST00000265245 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
LSG1-201ENST00000265245 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
LSG1-201ENST00000265245 FLIIQ13045 1269 aa12.74□□□□□ -0.37
LSG1-201ENST00000265245 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
LSG1-201ENST00000265245 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
LSG1-201ENST00000265245 K7ELQ4 463 aaPredicted RBP12.73□□□□□ -0.37
LSG1-201ENST00000265245 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
LSG1-201ENST00000265245 GNAI3P08754 354 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms