RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 KCNQ2O43526 872 aa11.42□□□□□ -0.58
ERCC8-201ENST00000265038 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
ERCC8-201ENST00000265038 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
ERCC8-201ENST00000265038 EP400Q96L91 3159 aa11.42□□□□□ -0.58
ERCC8-201ENST00000265038 EZH2Q15910 746 aaKnown RBP11.42□□□□□ -0.58
ERCC8-201ENST00000265038 WNK3Q9BYP7 1800 aa11.41□□□□□ -0.58
ERCC8-201ENST00000265038 AEBP1Q8IUX7 1158 aa11.4□□□□□ -0.58
ERCC8-201ENST00000265038 MAP2P11137 1827 aaKnown RBP11.4□□□□□ -0.58
ERCC8-201ENST00000265038 RGPD2P0DJD1 1756 aa11.4□□□□□ -0.58
ERCC8-201ENST00000265038 CYP27B1O15528 508 aa11.4□□□□□ -0.59
ERCC8-201ENST00000265038 PPP2R1AP30153 589 aa11.4□□□□□ -0.59
ERCC8-201ENST00000265038 PLSCR1O15162 318 aa11.39□□□□□ -0.59
ERCC8-201ENST00000265038 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
ERCC8-201ENST00000265038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■□□□ 12.1
ERCC8-201ENST00000265038 PCDH11XQ9BZA7 1347 aa11.38□□□□□ -0.59
ERCC8-201ENST00000265038 PCDH11YQ9BZA8 1340 aa11.38□□□□□ -0.59
ERCC8-201ENST00000265038 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
ERCC8-201ENST00000265038 SPG7Q9UQ90 795 aa11.38□□□□□ -0.59
ERCC8-201ENST00000265038 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
ERCC8-201ENST00000265038 PROM2Q8N271 834 aa11.37□□□□□ -0.59
ERCC8-201ENST00000265038 PARD3Q8TEW0 1356 aa11.37□□□□□ -0.59
ERCC8-201ENST00000265038 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
ERCC8-201ENST00000265038 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
ERCC8-201ENST00000265038 KDRP35968 1356 aa11.36□□□□□ -0.59
ERCC8-201ENST00000265038 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
ERCC8-201ENST00000265038 COL3A1P02461 1466 aaPredicted RBP11.36□□□□□ -0.59
ERCC8-201ENST00000265038 HMOX1P09601 288 aa11.36□□□□□ -0.59
ERCC8-201ENST00000265038 PHKG2P15735 406 aa11.36□□□□□ -0.59
ERCC8-201ENST00000265038 PLEKHO1Q53GL0 409 aaPredicted RBP11.35□□□□□ -0.59
ERCC8-201ENST00000265038 IFNL2Q8IZJ0 200 aa11.35□□□□□ -0.59
ERCC8-201ENST00000265038 SYTL4Q96C24 671 aaPredicted RBP11.35□□□□□ -0.59
ERCC8-201ENST00000265038 PLEKHG2Q9H7P9 1386 aa11.35□□□□□ -0.59
ERCC8-201ENST00000265038 AMOTQ4VCS5 1084 aa11.35□□□□□ -0.59
ERCC8-201ENST00000265038 CFAP53Q96M91 514 aa11.35□□□□□ -0.59
ERCC8-201ENST00000265038 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
ERCC8-201ENST00000265038 U2SURPO15042 1029 aaKnown RBP11.34□□□□□ -0.59
ERCC8-201ENST00000265038 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
ERCC8-201ENST00000265038 RALBP1Q15311 655 aa11.33□□□□□ -0.6
ERCC8-201ENST00000265038 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
ERCC8-201ENST00000265038 ZNF530Q6P9A1 599 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-201ENST00000265038 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
ERCC8-201ENST00000265038 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
ERCC8-201ENST00000265038 MPRIPQ6WCQ1 1025 aa11.31□□□□□ -0.6
ERCC8-201ENST00000265038 PIGBQ92521 554 aa11.31□□□□□ -0.6
ERCC8-201ENST00000265038 NHSQ6T4R5 1651 aa11.31□□□□□ -0.6
ERCC8-201ENST00000265038 SBF2Q86WG5 1849 aa11.31□□□□□ -0.6
ERCC8-201ENST00000265038 MTHFSDQ2M296 383 aaKnown RBP11.31□□□□□ -0.6
ERCC8-201ENST00000265038 LRRC4BQ9NT99 713 aa11.31□□□□□ -0.6
ERCC8-201ENST00000265038 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
ERCC8-201ENST00000265038 PKD1L3Q7Z443 1732 aa11.3□□□□□ -0.6
ERCC8-201ENST00000265038 NBPF14Q5TI25 921 aa11.3□□□□□ -0.6
ERCC8-201ENST00000265038 DCAF5Q96JK2 942 aa11.3□□□□□ -0.6
ERCC8-201ENST00000265038 ANO8Q9HCE9 1232 aaPredicted RBP11.3□□□□□ -0.6
ERCC8-201ENST00000265038 HSP90AB1P08238 724 aaKnown RBP11.3□□□□□ -0.6
ERCC8-201ENST00000265038 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
ERCC8-201ENST00000265038 RSPH6AQ9H0K4 717 aa11.3□□□□□ -0.6
ERCC8-201ENST00000265038 U2AF1L5P0DN76 240 aaPredicted RBP11.29□□□□□ -0.6
ERCC8-201ENST00000265038 KCNQ4P56696 695 aa11.29□□□□□ -0.6
ERCC8-201ENST00000265038 U2AF1Q01081 240 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERCC8-201ENST00000265038 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
ERCC8-201ENST00000265038 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
ERCC8-201ENST00000265038 PRKAR2BP31323 418 aa11.28□□□□□ -0.6
ERCC8-201ENST00000265038 SLC27A3Q5K4L6 730 aa11.28□□□□□ -0.6
ERCC8-201ENST00000265038 PHACTR3Q96KR7 559 aa11.28□□□□□ -0.6
ERCC8-201ENST00000265038 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-201ENST00000265038 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
ERCC8-201ENST00000265038 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
ERCC8-201ENST00000265038 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-201ENST00000265038 FCHSD2O94868 740 aa11.28□□□□□ -0.6
ERCC8-201ENST00000265038 KCNA4P22459 653 aa11.27□□□□□ -0.61
ERCC8-201ENST00000265038 LGR6Q9HBX8 967 aa11.27□□□□□ -0.61
ERCC8-201ENST00000265038 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.61
ERCC8-201ENST00000265038 RREB1Q92766 1687 aa11.27□□□□□ -0.61
ERCC8-201ENST00000265038 ATG3Q9NT62 314 aa11.26□□□□□ -0.61
ERCC8-201ENST00000265038 PALLDQ8WX93 1383 aa11.26□□□□□ -0.61
ERCC8-201ENST00000265038 DOT1LQ8TEK3 1739 aa11.26□□□□□ -0.61
ERCC8-201ENST00000265038 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
ERCC8-201ENST00000265038 CABP4P57796 275 aa11.26□□□□□ -0.61
ERCC8-201ENST00000265038 SLC15A2Q16348 729 aa11.26□□□□□ -0.61
ERCC8-201ENST00000265038 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-201ENST00000265038 STK32BQ9NY57 414 aa11.26□□□□□ -0.61
ERCC8-201ENST00000265038 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-201ENST00000265038 RGPD3A6NKT7 1758 aaPredicted RBP11.25□□□□□ -0.61
ERCC8-201ENST00000265038 RGPD4Q7Z3J3 1758 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 BTAF1O14981 1849 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 ZNF827Q17R98 1081 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 NFATC2IPQ8NCF5 419 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 GAS2L2Q8NHY3 880 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 NUP188Q5SRE5 1749 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 TOGARAM1Q9Y4F4 1720 aa11.25□□□□□ -0.61
ERCC8-201ENST00000265038 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
ERCC8-201ENST00000265038 PDGFDQ9GZP0 370 aaPredicted RBP11.24□□□□□ -0.61
ERCC8-201ENST00000265038 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
ERCC8-201ENST00000265038 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
ERCC8-201ENST00000265038 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
ERCC8-201ENST00000265038 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
ERCC8-201ENST00000265038 SIK1P57059 783 aa11.23□□□□□ -0.61
ERCC8-201ENST00000265038 MAP3K5Q99683 1374 aa11.22□□□□□ -0.61
ERCC8-201ENST00000265038 SLC4A9Q96Q91 983 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms