RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 MSH6P52701 1360 aa20.33■□□□□ 0.84
TM9SF1-201ENST00000261789 K7ELQ4 463 aaPredicted RBP20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 CEP85Q6P2H3 762 aa20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 GAS2L2Q8NHY3 880 aa20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 DDX11L8A8MPP1 907 aa20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 LTKP29376 864 aa20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 ANKRD44Q8N8A2 993 aa20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 RRAGDQ9NQL2 400 aaPredicted RBP20.32■□□□□ 0.84
TM9SF1-201ENST00000261789 ATP10DQ9P241 1426 aa20.31■□□□□ 0.84
TM9SF1-201ENST00000261789 TTC22Q5TAA0 569 aa20.31■□□□□ 0.84
TM9SF1-201ENST00000261789 TNRQ92752 1358 aa20.31■□□□□ 0.84
TM9SF1-201ENST00000261789 TMEM2Q9UHN6 1383 aa20.31■□□□□ 0.84
TM9SF1-201ENST00000261789 RAB3GAP1Q15042 981 aa20.3■□□□□ 0.84
TM9SF1-201ENST00000261789 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.3■□□□□ 0.84
TM9SF1-201ENST00000261789 F6X3S4 739 aa20.3■□□□□ 0.84
TM9SF1-201ENST00000261789 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
TM9SF1-201ENST00000261789 SLC4A10Q6U841 1118 aa20.29■□□□□ 0.84
TM9SF1-201ENST00000261789 G2E3Q7L622 706 aa20.29■□□□□ 0.84
TM9SF1-201ENST00000261789 PEAK1Q9H792 1746 aa20.29■□□□□ 0.84
TM9SF1-201ENST00000261789 OVOS2A0A0J9YW53 1432 aa20.29■□□□□ 0.84
TM9SF1-201ENST00000261789 OVOS2Q6IE36 1432 aa20.29■□□□□ 0.84
TM9SF1-201ENST00000261789 ADAMTS13Q76LX8 1427 aa20.29■□□□□ 0.84
TM9SF1-201ENST00000261789 MAP3K19Q56UN5 1328 aa20.28■□□□□ 0.84
TM9SF1-201ENST00000261789 RTL1A6NKG5 1358 aa20.28■□□□□ 0.84
TM9SF1-201ENST00000261789 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
TM9SF1-201ENST00000261789 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
TM9SF1-201ENST00000261789 KIF24Q5T7B8 1368 aa20.28■□□□□ 0.84
TM9SF1-201ENST00000261789 SSFA2P28290 1259 aa20.28■□□□□ 0.84
TM9SF1-201ENST00000261789 USP6P35125 1406 aa20.27■□□□□ 0.83
TM9SF1-201ENST00000261789 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.83
TM9SF1-201ENST00000261789 SDSP20132 328 aa20.27■□□□□ 0.83
TM9SF1-201ENST00000261789 CEBPAP49715 358 aaPredicted RBP20.27■□□□□ 0.83
TM9SF1-201ENST00000261789 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.83
TM9SF1-201ENST00000261789 RPAP2Q8IXW5 612 aaPredicted RBP20.26■□□□□ 0.83
TM9SF1-201ENST00000261789 AK9Q5TCS8 1911 aa20.25■□□□□ 0.83
TM9SF1-201ENST00000261789 CRB1P82279 1406 aa20.25■□□□□ 0.83
TM9SF1-201ENST00000261789 GBP4Q96PP9 640 aa20.25■□□□□ 0.83
TM9SF1-201ENST00000261789 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
TM9SF1-201ENST00000261789 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
TM9SF1-201ENST00000261789 RIMS1Q86UR5 1692 aaKnown RBP20.25■□□□□ 0.83
TM9SF1-201ENST00000261789 KIAA0232Q92628 1395 aa20.24■□□□□ 0.83
TM9SF1-201ENST00000261789 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
TM9SF1-201ENST00000261789 GAS2L3Q86XJ1 694 aa20.24■□□□□ 0.83
TM9SF1-201ENST00000261789 PTPRCP08575 1304 aa20.24■□□□□ 0.83
TM9SF1-201ENST00000261789 NECTIN2Q92692 538 aa20.23■□□□□ 0.83
TM9SF1-201ENST00000261789 GRPEL1Q9HAV7 217 aa20.23■□□□□ 0.83
TM9SF1-201ENST00000261789 HAP1P54257 671 aaPredicted RBP20.22■□□□□ 0.83
TM9SF1-201ENST00000261789 RTF1Q92541 710 aaKnown RBP20.22■□□□□ 0.83
TM9SF1-201ENST00000261789 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
TM9SF1-201ENST00000261789 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
TM9SF1-201ENST00000261789 MRE11P49959 708 aa20.22■□□□□ 0.83
TM9SF1-201ENST00000261789 TSHZ3Q63HK5 1081 aa20.22■□□□□ 0.83
TM9SF1-201ENST00000261789 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
TM9SF1-201ENST00000261789 NUTM2GQ5VZR2 741 aa20.21■□□□□ 0.83
TM9SF1-201ENST00000261789 EYA1Q99502 592 aa20.21■□□□□ 0.83
TM9SF1-201ENST00000261789 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
TM9SF1-201ENST00000261789 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.82
TM9SF1-201ENST00000261789 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
TM9SF1-201ENST00000261789 AMPHP49418 695 aa20.19■□□□□ 0.82
TM9SF1-201ENST00000261789 RABEP1Q15276 862 aa20.19■□□□□ 0.82
TM9SF1-201ENST00000261789 NGDNQ8NEJ9 315 aaKnown RBP20.19■□□□□ 0.82
TM9SF1-201ENST00000261789 EXOC6BQ9Y2D4 811 aa20.19■□□□□ 0.82
TM9SF1-201ENST00000261789 RGPD1P0DJD0 1748 aa20.19■□□□□ 0.82
TM9SF1-201ENST00000261789 PRKCSHP14314 528 aaPredicted RBP20.19■□□□□ 0.82
TM9SF1-201ENST00000261789 PKP1Q13835 747 aa20.19■□□□□ 0.82
TM9SF1-201ENST00000261789 TOPAZ1Q8N9V7 1692 aa20.18■□□□□ 0.82
TM9SF1-201ENST00000261789 SSH2Q76I76 1423 aa20.17■□□□□ 0.82
TM9SF1-201ENST00000261789 NALCNQ8IZF0 1738 aa20.17■□□□□ 0.82
TM9SF1-201ENST00000261789 CEP170BQ9Y4F5 1589 aaPredicted RBP20.16■□□□□ 0.82
TM9SF1-201ENST00000261789 ARHGEF10O15013 1369 aa20.16■□□□□ 0.82
TM9SF1-201ENST00000261789 PLEKHG1Q9ULL1 1385 aa20.16■□□□□ 0.82
TM9SF1-201ENST00000261789 BAG4O95429 457 aaKnown RBP20.16■□□□□ 0.82
TM9SF1-201ENST00000261789 FLT4P35916 1363 aa20.15■□□□□ 0.82
TM9SF1-201ENST00000261789 PDE1AP54750 535 aa20.15■□□□□ 0.82
TM9SF1-201ENST00000261789 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
TM9SF1-201ENST00000261789 ZGPATQ8N5A5 531 aaKnown RBP20.15■□□□□ 0.82
TM9SF1-201ENST00000261789 LTV1Q96GA3 475 aaPredicted RBP20.14■□□□□ 0.82
TM9SF1-201ENST00000261789 RGPD8O14715 1765 aaPredicted RBP20.14■□□□□ 0.81
TM9SF1-201ENST00000261789 HMMRO75330 724 aa20.14■□□□□ 0.81
TM9SF1-201ENST00000261789 FKBP5Q13451 457 aaPredicted RBP20.14■□□□□ 0.81
TM9SF1-201ENST00000261789 SBNO1A3KN83 1393 aa20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 PNMA6EA0A0J9YXQ4 647 aa20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 CCT4P50991 539 aaKnown RBP20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 NLRP6P59044 892 aa20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 SKOR2Q2VWA4 1001 aaPredicted RBP20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 MCTP1Q6DN14 999 aa20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 STK31Q9BXU1 1019 aa20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
TM9SF1-201ENST00000261789 GNAI2P04899 355 aa20.12■□□□□ 0.81
TM9SF1-201ENST00000261789 FLIIQ13045 1269 aa20.12■□□□□ 0.81
TM9SF1-201ENST00000261789 EID1Q9Y6B2 187 aa20.12■□□□□ 0.81
TM9SF1-201ENST00000261789 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
TM9SF1-201ENST00000261789 CHAMP1Q96JM3 812 aa20.12■□□□□ 0.81
TM9SF1-201ENST00000261789 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
TM9SF1-201ENST00000261789 KDRP35968 1356 aa20.12■□□□□ 0.81
TM9SF1-201ENST00000261789 ERC2O15083 957 aa20.11■□□□□ 0.81
TM9SF1-201ENST00000261789 FMN2Q9NZ56 1722 aa20.1■□□□□ 0.81
TM9SF1-201ENST00000261789 GOLGA6L22H0YM25 854 aa20.1■□□□□ 0.81
TM9SF1-201ENST00000261789 REC8O95072 547 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms