RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 USP26Q9BXU7 913 aa19.81■□□□□ 0.76
SNCAIP-202ENST00000261368 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
SNCAIP-202ENST00000261368 MCCP23508 829 aa19.81■□□□□ 0.76
SNCAIP-202ENST00000261368 PLCB2Q00722 1185 aa19.81■□□□□ 0.76
SNCAIP-202ENST00000261368 ERC2O15083 957 aa19.8■□□□□ 0.76
SNCAIP-202ENST00000261368 CCDC173Q0VFZ6 552 aa19.8■□□□□ 0.76
SNCAIP-202ENST00000261368 EIF4A2Q14240 407 aaKnown RBP19.8■□□□□ 0.76
SNCAIP-202ENST00000261368 MPNDQ8N594 471 aa19.8■□□□□ 0.76
SNCAIP-202ENST00000261368 KLHL40Q2TBA0 621 aa19.8■□□□□ 0.76
SNCAIP-202ENST00000261368 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
SNCAIP-202ENST00000261368 NEURL4Q96JN8 1562 aa19.8■□□□□ 0.76
SNCAIP-202ENST00000261368 VSIG10Q8N0Z9 540 aa19.79■□□□□ 0.76
SNCAIP-202ENST00000261368 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
SNCAIP-202ENST00000261368 NEXMIFQ5QGS0 1516 aa19.79■□□□□ 0.76
SNCAIP-202ENST00000261368 G2E3Q7L622 706 aa19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 NGDNQ8NEJ9 315 aaKnown RBP19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 UPF3BQ9BZI7 483 aaKnown RBP19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 RIMS2Q9UQ26 1411 aa19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 ZC3H13Q5T200 1668 aaKnown RBP19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 HECW2Q9P2P5 1572 aa19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 MSH6P52701 1360 aa19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 PNPLA6Q8IY17 1366 aa19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 MAP4K4O95819 1239 aaPredicted RBP19.78■□□□□ 0.76
SNCAIP-202ENST00000261368 ZNF853P0CG23 659 aa19.77■□□□□ 0.76
SNCAIP-202ENST00000261368 COL3A1P02461 1466 aaPredicted RBP19.77■□□□□ 0.76
SNCAIP-202ENST00000261368 SYCE3A1L190 88 aa19.77■□□□□ 0.76
SNCAIP-202ENST00000261368 ADGRB2O60241 1585 aa19.77■□□□□ 0.76
SNCAIP-202ENST00000261368 ZSCAN23Q3MJ62 389 aa19.77■□□□□ 0.75
SNCAIP-202ENST00000261368 IL1RAPL2Q9NP60 686 aa19.77■□□□□ 0.75
SNCAIP-202ENST00000261368 KIAA1211Q6ZU35 1233 aa19.76■□□□□ 0.75
SNCAIP-202ENST00000261368 DDIT3P35638 169 aa19.76■□□□□ 0.75
SNCAIP-202ENST00000261368 BRPF1P55201 1214 aaPredicted RBP19.76■□□□□ 0.75
SNCAIP-202ENST00000261368 DNTTIP2Q5QJE6 756 aaKnown RBP19.76■□□□□ 0.75
SNCAIP-202ENST00000261368 ARHGEF28Q8N1W1 1705 aaKnown RBP19.75■□□□□ 0.75
SNCAIP-202ENST00000261368 PTPRMP28827 1452 aa19.75■□□□□ 0.75
SNCAIP-202ENST00000261368 FRMPD1Q5SYB0 1578 aa19.75■□□□□ 0.75
SNCAIP-202ENST00000261368 OS9Q13438 667 aaPredicted RBP19.75■□□□□ 0.75
SNCAIP-202ENST00000261368 UBE2Q2Q8WVN8 375 aa19.75■□□□□ 0.75
SNCAIP-202ENST00000261368 R3HCC1Q9Y3T6 440 aaKnown RBP19.75■□□□□ 0.75
SNCAIP-202ENST00000261368 GNAI2P04899 355 aa19.75■□□□□ 0.75
SNCAIP-202ENST00000261368 EIF2S2P20042 333 aaKnown RBP19.74■□□□□ 0.75
SNCAIP-202ENST00000261368 HDGFP51858 240 aaKnown RBP19.74■□□□□ 0.75
SNCAIP-202ENST00000261368 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
SNCAIP-202ENST00000261368 GDPD2Q9HCC8 539 aa19.74■□□□□ 0.75
SNCAIP-202ENST00000261368 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
SNCAIP-202ENST00000261368 RBM10P98175 930 aaKnown RBP19.74■□□□□ 0.75
SNCAIP-202ENST00000261368 CD163L1Q9NR16 1453 aa19.73■□□□□ 0.75
SNCAIP-202ENST00000261368 ZSCAN30Q86W11 494 aa19.73■□□□□ 0.75
SNCAIP-202ENST00000261368 CWC22Q9HCG8 908 aaKnown RBP19.73■□□□□ 0.75
SNCAIP-202ENST00000261368 LARP6Q9BRS8 491 aaKnown RBP19.73■□□□□ 0.75
SNCAIP-202ENST00000261368 PTCH1Q13635 1447 aa19.72■□□□□ 0.75
SNCAIP-202ENST00000261368 PDE1AP54750 535 aa19.72■□□□□ 0.75
SNCAIP-202ENST00000261368 LRRCC1Q9C099 1032 aa19.72■□□□□ 0.75
SNCAIP-202ENST00000261368 AK9Q5TCS8 1911 aa19.71■□□□□ 0.75
SNCAIP-202ENST00000261368 USP32Q8NFA0 1604 aa19.71■□□□□ 0.75
SNCAIP-202ENST00000261368 ACEP12821 1306 aa19.71■□□□□ 0.75
SNCAIP-202ENST00000261368 RBSNQ9H1K0 784 aa19.71■□□□□ 0.75
SNCAIP-202ENST00000261368 XPCQ01831 940 aaPredicted RBP19.7■□□□□ 0.74
SNCAIP-202ENST00000261368 TMX3Q96JJ7 454 aa19.7■□□□□ 0.74
SNCAIP-202ENST00000261368 LMBRD1Q9NUN5 540 aa19.7■□□□□ 0.74
SNCAIP-202ENST00000261368 FAM13BQ9NYF5 915 aa19.7■□□□□ 0.74
SNCAIP-202ENST00000261368 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
SNCAIP-202ENST00000261368 NCOA3Q9Y6Q9 1424 aa19.7■□□□□ 0.74
SNCAIP-202ENST00000261368 CHL1O00533 1208 aa19.69■□□□□ 0.74
SNCAIP-202ENST00000261368 EDC4Q6P2E9 1401 aaKnown RBP19.69■□□□□ 0.74
SNCAIP-202ENST00000261368 DTNBO60941 627 aa19.69■□□□□ 0.74
SNCAIP-202ENST00000261368 CCT4P50991 539 aaKnown RBP19.69■□□□□ 0.74
SNCAIP-202ENST00000261368 MX1P20591 662 aa19.68■□□□□ 0.74
SNCAIP-202ENST00000261368 RTL1A6NKG5 1358 aa19.68■□□□□ 0.74
SNCAIP-202ENST00000261368 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
SNCAIP-202ENST00000261368 PIK3C2BO00750 1634 aa19.68■□□□□ 0.74
SNCAIP-202ENST00000261368 PTPRCP08575 1304 aa19.68■□□□□ 0.74
SNCAIP-202ENST00000261368 TTC21BQ7Z4L5 1316 aa19.68■□□□□ 0.74
SNCAIP-202ENST00000261368 SURF6O75683 361 aaKnown RBP19.68■□□□□ 0.74
SNCAIP-202ENST00000261368 LRRFIP2Q9Y608 721 aaKnown RBP19.67■□□□□ 0.74
SNCAIP-202ENST00000261368 METP08581 1390 aa19.67■□□□□ 0.74
SNCAIP-202ENST00000261368 NLRP6P59044 892 aa19.66■□□□□ 0.74
SNCAIP-202ENST00000261368 UBTFL1P0CB47 393 aaPredicted RBP19.66■□□□□ 0.74
SNCAIP-202ENST00000261368 MED14O60244 1454 aa19.66■□□□□ 0.74
SNCAIP-202ENST00000261368 ARHGEF40Q8TER5 1519 aa19.66■□□□□ 0.74
SNCAIP-202ENST00000261368 GNAI3P08754 354 aa19.65■□□□□ 0.74
SNCAIP-202ENST00000261368 FLIIQ13045 1269 aa19.65■□□□□ 0.74
SNCAIP-202ENST00000261368 SIGLEC1Q9BZZ2 1709 aa19.65■□□□□ 0.74
SNCAIP-202ENST00000261368 ALKQ9UM73 1620 aa19.65■□□□□ 0.74
SNCAIP-202ENST00000261368 KCNJ4P48050 445 aa19.64■□□□□ 0.74
SNCAIP-202ENST00000261368 CCDC30Q5VVM6 783 aa19.64■□□□□ 0.74
SNCAIP-202ENST00000261368 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.64■□□□□ 0.74
SNCAIP-202ENST00000261368 GPT2Q8TD30 523 aa19.64■□□□□ 0.74
SNCAIP-202ENST00000261368 CFAP74Q9C0B2 1584 aa19.64■□□□□ 0.74
SNCAIP-202ENST00000261368 PNMA6EA0A0J9YXQ4 647 aa19.64■□□□□ 0.73
SNCAIP-202ENST00000261368 PALD1Q9ULE6 856 aa19.64■□□□□ 0.73
SNCAIP-202ENST00000261368 PIK3R4Q99570 1358 aa19.64■□□□□ 0.73
SNCAIP-202ENST00000261368 SYAP1Q96A49 352 aaPredicted RBP19.64■□□□□ 0.73
SNCAIP-202ENST00000261368 USHBP1Q8N6Y0 703 aa19.63■□□□□ 0.73
SNCAIP-202ENST00000261368 ESYT1Q9BSJ8 1104 aa19.63■□□□□ 0.73
SNCAIP-202ENST00000261368 TMEM63CQ9P1W3 806 aa19.63■□□□□ 0.73
SNCAIP-202ENST00000261368 NSFL1CQ9UNZ2 370 aaKnown RBP19.63■□□□□ 0.73
SNCAIP-202ENST00000261368 ARHGAP31Q2M1Z3 1444 aa19.63■□□□□ 0.73
SNCAIP-202ENST00000261368 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
SNCAIP-202ENST00000261368 DDX54Q8TDD1 881 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms