RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 GPT2Q8TD30 523 aa18.15■□□□□ 0.5
MSI1-201ENST00000257552 SYCE3A1L190 88 aa18.14■□□□□ 0.49
MSI1-201ENST00000257552 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
MSI1-201ENST00000257552 PRDM10Q9NQV6 1147 aa18.14■□□□□ 0.49
MSI1-201ENST00000257552 ZNF500O60304 480 aaPredicted RBP18.14■□□□□ 0.49
MSI1-201ENST00000257552 TERF1P54274 439 aa18.14■□□□□ 0.49
MSI1-201ENST00000257552 RABEP1Q15276 862 aa18.13■□□□□ 0.49
MSI1-201ENST00000257552 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
MSI1-201ENST00000257552 MPNDQ8N594 471 aa18.13■□□□□ 0.49
MSI1-201ENST00000257552 ZKSCAN5Q9Y2L8 839 aa18.13■□□□□ 0.49
MSI1-201ENST00000257552 C16orf71Q8IYS4 520 aaPredicted RBP18.13■□□□□ 0.49
MSI1-201ENST00000257552 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
MSI1-201ENST00000257552 HS1BP3Q53T59 392 aa18.12■□□□□ 0.49
MSI1-201ENST00000257552 PDLIM2Q96JY6 352 aa18.12■□□□□ 0.49
MSI1-201ENST00000257552 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
MSI1-201ENST00000257552 NSFL1CQ9UNZ2 370 aaKnown RBP18.12■□□□□ 0.49
MSI1-201ENST00000257552 APBB1O00213 710 aa18.12■□□□□ 0.49
MSI1-201ENST00000257552 TSPYL6Q8N831 410 aa18.12■□□□□ 0.49
MSI1-201ENST00000257552 RBM33Q96EV2 1170 aaKnown RBP18.12■□□□□ 0.49
MSI1-201ENST00000257552 MAP7D2Q96T17 732 aa18.12■□□□□ 0.49
MSI1-201ENST00000257552 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
MSI1-201ENST00000257552 COG3Q96JB2 828 aa18.11■□□□□ 0.49
MSI1-201ENST00000257552 TMEM63CQ9P1W3 806 aa18.11■□□□□ 0.49
MSI1-201ENST00000257552 EID1Q9Y6B2 187 aa18.11■□□□□ 0.49
MSI1-201ENST00000257552 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
MSI1-201ENST00000257552 IL16Q14005 1332 aa18.1■□□□□ 0.49
MSI1-201ENST00000257552 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
MSI1-201ENST00000257552 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
MSI1-201ENST00000257552 AMOTL2Q9Y2J4 779 aa18.09■□□□□ 0.49
MSI1-201ENST00000257552 PLEKHM2Q8IWE5 1019 aa18.09■□□□□ 0.49
MSI1-201ENST00000257552 JARID2Q92833 1246 aaPredicted RBP18.09■□□□□ 0.49
MSI1-201ENST00000257552 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
MSI1-201ENST00000257552 OTUD7AQ8TE49 926 aaPredicted RBP18.08■□□□□ 0.49
MSI1-201ENST00000257552 ZDHHC9Q9Y397 364 aa18.08■□□□□ 0.49
MSI1-201ENST00000257552 FOXD4L6Q3SYB3 417 aaPredicted RBP18.07■□□□□ 0.48
MSI1-201ENST00000257552 FOXD4L3Q6VB84 417 aaPredicted RBP18.07■□□□□ 0.48
MSI1-201ENST00000257552 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
MSI1-201ENST00000257552 DNTTIP2Q5QJE6 756 aaKnown RBP18.07■□□□□ 0.48
MSI1-201ENST00000257552 MRPL50Q8N5N7 158 aaKnown RBP18.07■□□□□ 0.48
MSI1-201ENST00000257552 AK9Q5TCS8 1911 aa18.07■□□□□ 0.48
MSI1-201ENST00000257552 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
MSI1-201ENST00000257552 ACEP12821 1306 aa18.07■□□□□ 0.48
MSI1-201ENST00000257552 ADAMTS13Q76LX8 1427 aa18.06■□□□□ 0.48
MSI1-201ENST00000257552 VAMP4O75379 141 aa18.06■□□□□ 0.48
MSI1-201ENST00000257552 LRSAM1Q6UWE0 723 aa18.06■□□□□ 0.48
MSI1-201ENST00000257552 TSC1Q92574 1164 aa18.06■□□□□ 0.48
MSI1-201ENST00000257552 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
MSI1-201ENST00000257552 DYNC1I1O14576 645 aa18.06■□□□□ 0.48
MSI1-201ENST00000257552 CCDC39Q9UFE4 941 aa18.06■□□□□ 0.48
MSI1-201ENST00000257552 ZHX1Q9UKY1 873 aaPredicted RBP18.06■□□□□ 0.48
MSI1-201ENST00000257552 DLC1Q96QB1 1528 aa18.05■□□□□ 0.48
MSI1-201ENST00000257552 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
MSI1-201ENST00000257552 SASS6Q6UVJ0 657 aa18.05■□□□□ 0.48
MSI1-201ENST00000257552 ST18O60284 1047 aa18.05■□□□□ 0.48
MSI1-201ENST00000257552 DCTN1Q14203 1278 aa18.05■□□□□ 0.48
MSI1-201ENST00000257552 CPS1P31327 1500 aa18.04■□□□□ 0.48
MSI1-201ENST00000257552 PLEKHG5O94827 1062 aa18.04■□□□□ 0.48
MSI1-201ENST00000257552 CHMP4BQ9H444 224 aaKnown RBP18.04■□□□□ 0.48
MSI1-201ENST00000257552 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
MSI1-201ENST00000257552 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
MSI1-201ENST00000257552 FCHSD2O94868 740 aa18.04■□□□□ 0.48
MSI1-201ENST00000257552 TTC22Q5TAA0 569 aa18.04■□□□□ 0.48
MSI1-201ENST00000257552 NUTM2GQ5VZR2 741 aa18.04■□□□□ 0.48
MSI1-201ENST00000257552 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
MSI1-201ENST00000257552 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
MSI1-201ENST00000257552 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
MSI1-201ENST00000257552 NOL8Q76FK4 1167 aaKnown RBP18.03■□□□□ 0.48
MSI1-201ENST00000257552 PNPLA6Q8IY17 1366 aa18.03■□□□□ 0.48
MSI1-201ENST00000257552 EDC4Q6P2E9 1401 aaKnown RBP18.03■□□□□ 0.48
MSI1-201ENST00000257552 ATP7BP35670 1465 aa18.03■□□□□ 0.48
MSI1-201ENST00000257552 INTS3Q68E01 1043 aaKnown RBP18.03■□□□□ 0.48
MSI1-201ENST00000257552 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
MSI1-201ENST00000257552 AEBP1Q8IUX7 1158 aa18.03■□□□□ 0.48
MSI1-201ENST00000257552 ZNF830Q96NB3 372 aaPredicted RBP18.03■□□□□ 0.48
MSI1-201ENST00000257552 IL13P35225 146 aa18.02■□□□□ 0.48
MSI1-201ENST00000257552 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
MSI1-201ENST00000257552 SDSP20132 328 aa18.01■□□□□ 0.47
MSI1-201ENST00000257552 MCM5P33992 734 aa18.01■□□□□ 0.47
MSI1-201ENST00000257552 MED14O60244 1454 aa18.01■□□□□ 0.47
MSI1-201ENST00000257552 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
MSI1-201ENST00000257552 FAM177BA6PVY3 158 aa18■□□□□ 0.47
MSI1-201ENST00000257552 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
MSI1-201ENST00000257552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18■□□□□ 0.47
MSI1-201ENST00000257552 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
MSI1-201ENST00000257552 FAM135BQ49AJ0 1406 aa18■□□□□ 0.47
MSI1-201ENST00000257552 TTC21BQ7Z4L5 1316 aa18■□□□□ 0.47
MSI1-201ENST00000257552 MTERF4Q7Z6M4 381 aaKnown RBP17.99■□□□□ 0.47
MSI1-201ENST00000257552 SMAP1Q8IYB5 467 aaPredicted RBP17.99■□□□□ 0.47
MSI1-201ENST00000257552 THEMISQ8N1K5 641 aaPredicted RBP17.99■□□□□ 0.47
MSI1-201ENST00000257552 PLEKHG1Q9ULL1 1385 aa17.99■□□□□ 0.47
MSI1-201ENST00000257552 KIAA2012Q0VF49 1180 aa17.99■□□□□ 0.47
MSI1-201ENST00000257552 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
MSI1-201ENST00000257552 ARHGAP45Q92619 1136 aa17.99■□□□□ 0.47
MSI1-201ENST00000257552 GDPD2Q9HCC8 539 aa17.99■□□□□ 0.47
MSI1-201ENST00000257552 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
MSI1-201ENST00000257552 KCNA6P17658 529 aa17.98■□□□□ 0.47
MSI1-201ENST00000257552 NEK4P51957 841 aa17.98■□□□□ 0.47
MSI1-201ENST00000257552 SULT6B1Q6IMI4 303 aa17.98■□□□□ 0.47
MSI1-201ENST00000257552 CASC1Q6TDU7 716 aa17.98■□□□□ 0.47
MSI1-201ENST00000257552 C17orf53Q8N3J3 647 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms