RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 CHMP4BQ9H444 224 aaKnown RBP20.77■□□□□ 0.92
UBQLN1-201ENST00000257468 CEP170BQ9Y4F5 1589 aaPredicted RBP20.77■□□□□ 0.92
UBQLN1-201ENST00000257468 SBNO1A3KN83 1393 aa20.77■□□□□ 0.91
UBQLN1-201ENST00000257468 ARHGEF10O15013 1369 aa20.77■□□□□ 0.91
UBQLN1-201ENST00000257468 FLT4P35916 1363 aa20.77■□□□□ 0.91
UBQLN1-201ENST00000257468 AMPHP49418 695 aa20.76■□□□□ 0.91
UBQLN1-201ENST00000257468 ANTXR1Q9H6X2 564 aa20.75■□□□□ 0.91
UBQLN1-201ENST00000257468 EYA1Q99502 592 aa20.75■□□□□ 0.91
UBQLN1-201ENST00000257468 NLRP6P59044 892 aa20.74■□□□□ 0.91
UBQLN1-201ENST00000257468 GSE1Q14687 1217 aa20.74■□□□□ 0.91
UBQLN1-201ENST00000257468 ZNF142P52746 1687 aaPredicted RBP20.73■□□□□ 0.91
UBQLN1-201ENST00000257468 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
UBQLN1-201ENST00000257468 BMP2KLQ5H9B9 411 aa20.72■□□□□ 0.91
UBQLN1-201ENST00000257468 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
UBQLN1-201ENST00000257468 MSH6P52701 1360 aa20.71■□□□□ 0.91
UBQLN1-201ENST00000257468 RBM33Q96EV2 1170 aaKnown RBP20.71■□□□□ 0.91
UBQLN1-201ENST00000257468 KDRP35968 1356 aa20.71■□□□□ 0.91
UBQLN1-201ENST00000257468 IGSF1Q8N6C5 1336 aa20.71■□□□□ 0.91
UBQLN1-201ENST00000257468 MARF1Q9Y4F3 1742 aaKnown RBP20.71■□□□□ 0.91
UBQLN1-201ENST00000257468 RTF1Q92541 710 aaKnown RBP20.7■□□□□ 0.9
UBQLN1-201ENST00000257468 TSPYL4Q9UJ04 414 aa20.7■□□□□ 0.9
UBQLN1-201ENST00000257468 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
UBQLN1-201ENST00000257468 ATP10DQ9P241 1426 aa20.69■□□□□ 0.9
UBQLN1-201ENST00000257468 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
UBQLN1-201ENST00000257468 G2E3Q7L622 706 aa20.68■□□□□ 0.9
UBQLN1-201ENST00000257468 LTV1Q96GA3 475 aaPredicted RBP20.68■□□□□ 0.9
UBQLN1-201ENST00000257468 MEIS3Q99687 375 aa20.67■□□□□ 0.9
UBQLN1-201ENST00000257468 ANKARQ7Z5J8 1434 aa20.67■□□□□ 0.9
UBQLN1-201ENST00000257468 HOXC9P31274 260 aa20.67■□□□□ 0.9
UBQLN1-201ENST00000257468 ABTB2Q8N961 1025 aa20.67■□□□□ 0.9
UBQLN1-201ENST00000257468 HAP1P54257 671 aaPredicted RBP20.66■□□□□ 0.9
UBQLN1-201ENST00000257468 TBC1D9Q6ZT07 1266 aa20.66■□□□□ 0.9
UBQLN1-201ENST00000257468 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
UBQLN1-201ENST00000257468 F6X3S4 739 aa20.66■□□□□ 0.9
UBQLN1-201ENST00000257468 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
UBQLN1-201ENST00000257468 DCTPP1Q9H773 170 aa20.66■□□□□ 0.9
UBQLN1-201ENST00000257468 PTPRCP08575 1304 aa20.65■□□□□ 0.9
UBQLN1-201ENST00000257468 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
UBQLN1-201ENST00000257468 ANKRD44Q8N8A2 993 aa20.65■□□□□ 0.9
UBQLN1-201ENST00000257468 RTL1A6NKG5 1358 aa20.65■□□□□ 0.9
UBQLN1-201ENST00000257468 GSPT1P15170 499 aaKnown RBP20.65■□□□□ 0.9
UBQLN1-201ENST00000257468 CEP85Q6P2H3 762 aa20.65■□□□□ 0.9
UBQLN1-201ENST00000257468 NWD1Q149M9 1564 aa20.64■□□□□ 0.9
UBQLN1-201ENST00000257468 APBB1O00213 710 aa20.64■□□□□ 0.89
UBQLN1-201ENST00000257468 GAS2L2Q8NHY3 880 aa20.64■□□□□ 0.89
UBQLN1-201ENST00000257468 SLC4A10Q6U841 1118 aa20.64■□□□□ 0.89
UBQLN1-201ENST00000257468 PLEKHM2Q8IWE5 1019 aa20.64■□□□□ 0.89
UBQLN1-201ENST00000257468 USHBP1Q8N6Y0 703 aa20.64■□□□□ 0.89
UBQLN1-201ENST00000257468 OTUD7AQ8TE49 926 aaPredicted RBP20.63■□□□□ 0.89
UBQLN1-201ENST00000257468 SETD1BQ9UPS6 1966 aaKnown RBP20.63■□□□□ 0.89
UBQLN1-201ENST00000257468 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
UBQLN1-201ENST00000257468 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
UBQLN1-201ENST00000257468 HSCBQ8IWL3 235 aa20.62■□□□□ 0.89
UBQLN1-201ENST00000257468 LRRC37A3O60309 1634 aa20.61■□□□□ 0.89
UBQLN1-201ENST00000257468 KIF2CQ99661 725 aa20.6■□□□□ 0.89
UBQLN1-201ENST00000257468 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
UBQLN1-201ENST00000257468 RPAP2Q8IXW5 612 aaPredicted RBP20.6■□□□□ 0.89
UBQLN1-201ENST00000257468 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
UBQLN1-201ENST00000257468 PHF8Q9UPP1 1060 aa20.59■□□□□ 0.89
UBQLN1-201ENST00000257468 IL17REQ8NFR9 667 aa20.58■□□□□ 0.89
UBQLN1-201ENST00000257468 USP54Q70EL1 1684 aa20.58■□□□□ 0.88
UBQLN1-201ENST00000257468 CDC45O75419 566 aa20.57■□□□□ 0.88
UBQLN1-201ENST00000257468 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
UBQLN1-201ENST00000257468 LTN1O94822 1766 aa20.57■□□□□ 0.88
UBQLN1-201ENST00000257468 TTC22Q5TAA0 569 aa20.57■□□□□ 0.88
UBQLN1-201ENST00000257468 RBM42Q9BTD8 480 aaKnown RBP20.57■□□□□ 0.88
UBQLN1-201ENST00000257468 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
UBQLN1-201ENST00000257468 ZBTB7CA1YPR0 619 aa20.56■□□□□ 0.88
UBQLN1-201ENST00000257468 CD2BP2O95400 341 aaKnown RBP20.56■□□□□ 0.88
UBQLN1-201ENST00000257468 FAM208AQ9UK61 1670 aaKnown RBP20.56■□□□□ 0.88
UBQLN1-201ENST00000257468 PLEKHG5O94827 1062 aa20.55■□□□□ 0.88
UBQLN1-201ENST00000257468 ANKLE2Q86XL3 938 aa20.55■□□□□ 0.88
UBQLN1-201ENST00000257468 STK31Q9BXU1 1019 aa20.55■□□□□ 0.88
UBQLN1-201ENST00000257468 BRPF3Q9ULD4 1205 aa20.55■□□□□ 0.88
UBQLN1-201ENST00000257468 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
UBQLN1-201ENST00000257468 CHMP5Q9NZZ3 219 aa20.55■□□□□ 0.88
UBQLN1-201ENST00000257468 FLIIQ13045 1269 aa20.53■□□□□ 0.88
UBQLN1-201ENST00000257468 FKBP5Q13451 457 aaPredicted RBP20.53■□□□□ 0.88
UBQLN1-201ENST00000257468 SNX21Q969T3 373 aa20.53■□□□□ 0.88
UBQLN1-201ENST00000257468 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
UBQLN1-201ENST00000257468 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
UBQLN1-201ENST00000257468 ESCO1Q5FWF5 840 aa20.53■□□□□ 0.88
UBQLN1-201ENST00000257468 CCDC30Q5VVM6 783 aa20.51■□□□□ 0.87
UBQLN1-201ENST00000257468 NFAT5O94916 1531 aa20.51■□□□□ 0.87
UBQLN1-201ENST00000257468 HSP90AB1P08238 724 aaKnown RBP20.51■□□□□ 0.87
UBQLN1-201ENST00000257468 NBPF6Q5VWK0 638 aa20.51■□□□□ 0.87
UBQLN1-201ENST00000257468 NBPF4Q96M43 638 aa20.51■□□□□ 0.87
UBQLN1-201ENST00000257468 FOXD4L1Q9NU39 408 aa20.51■□□□□ 0.87
UBQLN1-201ENST00000257468 SDSP20132 328 aa20.5■□□□□ 0.87
UBQLN1-201ENST00000257468 MCM4P33991 863 aa20.5■□□□□ 0.87
UBQLN1-201ENST00000257468 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
UBQLN1-201ENST00000257468 PSME1Q06323 249 aa20.5■□□□□ 0.87
UBQLN1-201ENST00000257468 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
UBQLN1-201ENST00000257468 DDIT3P35638 169 aa20.5■□□□□ 0.87
UBQLN1-201ENST00000257468 EXOC6BQ9Y2D4 811 aa20.5■□□□□ 0.87
UBQLN1-201ENST00000257468 IP6K1Q92551 441 aa20.49■□□□□ 0.87
UBQLN1-201ENST00000257468 RGPD2P0DJD1 1756 aa20.49■□□□□ 0.87
UBQLN1-201ENST00000257468 GNAI2P04899 355 aa20.48■□□□□ 0.87
UBQLN1-201ENST00000257468 HMMRO75330 724 aa20.48■□□□□ 0.87
UBQLN1-201ENST00000257468 LRRC59Q96AG4 307 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms