RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TSPYL4Q9UJ04 414 aa19.82■□□□□ 0.76
LRFN1-201ENST00000248668 ABCC4O15439 1325 aa19.82■□□□□ 0.76
LRFN1-201ENST00000248668 NUCB1Q02818 461 aa19.81■□□□□ 0.76
LRFN1-201ENST00000248668 XPCQ01831 940 aaPredicted RBP19.81■□□□□ 0.76
LRFN1-201ENST00000248668 API5Q9BZZ5 524 aaKnown RBP19.81■□□□□ 0.76
LRFN1-201ENST00000248668 APBB1O00213 710 aa19.81■□□□□ 0.76
LRFN1-201ENST00000248668 TBC1D32Q96NH3 1257 aa19.8■□□□□ 0.76
LRFN1-201ENST00000248668 SBNO1A3KN83 1393 aa19.8■□□□□ 0.76
LRFN1-201ENST00000248668 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
LRFN1-201ENST00000248668 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
LRFN1-201ENST00000248668 ANKLE2Q86XL3 938 aa19.79■□□□□ 0.76
LRFN1-201ENST00000248668 SLC4A10Q6U841 1118 aa19.79■□□□□ 0.76
LRFN1-201ENST00000248668 HOXC9P31274 260 aa19.78■□□□□ 0.76
LRFN1-201ENST00000248668 ESCO1Q5FWF5 840 aa19.78■□□□□ 0.76
LRFN1-201ENST00000248668 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
LRFN1-201ENST00000248668 LMOD2Q6P5Q4 547 aa19.78■□□□□ 0.76
LRFN1-201ENST00000248668 VIRMAQ69YN4 1812 aaKnown RBP19.77■□□□□ 0.76
LRFN1-201ENST00000248668 F6X3S4 739 aa19.77■□□□□ 0.76
LRFN1-201ENST00000248668 PHF8Q9UPP1 1060 aa19.77■□□□□ 0.76
LRFN1-201ENST00000248668 CEP170BQ9Y4F5 1589 aaPredicted RBP19.77■□□□□ 0.76
LRFN1-201ENST00000248668 G2E3Q7L622 706 aa19.77■□□□□ 0.75
LRFN1-201ENST00000248668 FRAT2O75474 233 aaPredicted RBP19.76■□□□□ 0.75
LRFN1-201ENST00000248668 BECN1Q14457 450 aa19.76■□□□□ 0.75
LRFN1-201ENST00000248668 C22orf23Q9BZE7 217 aa19.76■□□□□ 0.75
LRFN1-201ENST00000248668 ARHGEF10O15013 1369 aa19.76■□□□□ 0.75
LRFN1-201ENST00000248668 IGSF1Q8N6C5 1336 aa19.74■□□□□ 0.75
LRFN1-201ENST00000248668 SETD1BQ9UPS6 1966 aaKnown RBP19.74■□□□□ 0.75
LRFN1-201ENST00000248668 PSME1Q06323 249 aa19.74■□□□□ 0.75
LRFN1-201ENST00000248668 CRB1P82279 1406 aa19.74■□□□□ 0.75
LRFN1-201ENST00000248668 MEIS3Q99687 375 aa19.74■□□□□ 0.75
LRFN1-201ENST00000248668 TBC1D2Q9BYX2 928 aa19.74■□□□□ 0.75
LRFN1-201ENST00000248668 CHMP4BQ9H444 224 aaKnown RBP19.74■□□□□ 0.75
LRFN1-201ENST00000248668 PIK3C2AO00443 1686 aa19.73■□□□□ 0.75
LRFN1-201ENST00000248668 GAS2L2Q8NHY3 880 aa19.73■□□□□ 0.75
LRFN1-201ENST00000248668 NALCNQ8IZF0 1738 aa19.72■□□□□ 0.75
LRFN1-201ENST00000248668 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
LRFN1-201ENST00000248668 MSH6P52701 1360 aa19.72■□□□□ 0.75
LRFN1-201ENST00000248668 C16orf71Q8IYS4 520 aaPredicted RBP19.71■□□□□ 0.75
LRFN1-201ENST00000248668 USP35Q9P2H5 1018 aa19.71■□□□□ 0.75
LRFN1-201ENST00000248668 XRN1Q8IZH2 1706 aaKnown RBP19.7■□□□□ 0.74
LRFN1-201ENST00000248668 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
LRFN1-201ENST00000248668 GNAT3A8MTJ3 354 aa19.69■□□□□ 0.74
LRFN1-201ENST00000248668 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
LRFN1-201ENST00000248668 INTS3Q68E01 1043 aaKnown RBP19.69■□□□□ 0.74
LRFN1-201ENST00000248668 KDRP35968 1356 aa19.69■□□□□ 0.74
LRFN1-201ENST00000248668 IL17REQ8NFR9 667 aa19.69■□□□□ 0.74
LRFN1-201ENST00000248668 RGPD1P0DJD0 1748 aa19.68■□□□□ 0.74
LRFN1-201ENST00000248668 HAP1P54257 671 aaPredicted RBP19.68■□□□□ 0.74
LRFN1-201ENST00000248668 OTUD7AQ8TE49 926 aaPredicted RBP19.68■□□□□ 0.74
LRFN1-201ENST00000248668 LRRC59Q96AG4 307 aaKnown RBP19.68■□□□□ 0.74
LRFN1-201ENST00000248668 RGS12O14924 1447 aa19.68■□□□□ 0.74
LRFN1-201ENST00000248668 KIAA0232Q92628 1395 aa19.68■□□□□ 0.74
LRFN1-201ENST00000248668 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
LRFN1-201ENST00000248668 PODXL2Q9NZ53 605 aa19.66■□□□□ 0.74
LRFN1-201ENST00000248668 NBPF6Q5VWK0 638 aa19.66■□□□□ 0.74
LRFN1-201ENST00000248668 NBPF4Q96M43 638 aa19.66■□□□□ 0.74
LRFN1-201ENST00000248668 STK31Q9BXU1 1019 aa19.66■□□□□ 0.74
LRFN1-201ENST00000248668 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
LRFN1-201ENST00000248668 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
LRFN1-201ENST00000248668 CEP85Q6P2H3 762 aa19.66■□□□□ 0.74
LRFN1-201ENST00000248668 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
LRFN1-201ENST00000248668 PTPRCP08575 1304 aa19.64■□□□□ 0.73
LRFN1-201ENST00000248668 TBC1D9Q6ZT07 1266 aa19.64■□□□□ 0.73
LRFN1-201ENST00000248668 ANKRD44Q8N8A2 993 aa19.64■□□□□ 0.73
LRFN1-201ENST00000248668 EIF2S2P20042 333 aaKnown RBP19.63■□□□□ 0.73
LRFN1-201ENST00000248668 DCTPP1Q9H773 170 aa19.63■□□□□ 0.73
LRFN1-201ENST00000248668 RTL1A6NKG5 1358 aa19.63■□□□□ 0.73
LRFN1-201ENST00000248668 GSPT1P15170 499 aaKnown RBP19.62■□□□□ 0.73
LRFN1-201ENST00000248668 LGR6Q9HBX8 967 aa19.62■□□□□ 0.73
LRFN1-201ENST00000248668 PLEKHM2Q8IWE5 1019 aa19.62■□□□□ 0.73
LRFN1-201ENST00000248668 FLIIQ13045 1269 aa19.61■□□□□ 0.73
LRFN1-201ENST00000248668 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
LRFN1-201ENST00000248668 ATP10DQ9P241 1426 aa19.61■□□□□ 0.73
LRFN1-201ENST00000248668 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
LRFN1-201ENST00000248668 IP6K1Q92551 441 aa19.61■□□□□ 0.73
LRFN1-201ENST00000248668 TAF7Q15545 349 aaPredicted RBP19.6■□□□□ 0.73
LRFN1-201ENST00000248668 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
LRFN1-201ENST00000248668 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
LRFN1-201ENST00000248668 EXOC6BQ9Y2D4 811 aa19.59■□□□□ 0.73
LRFN1-201ENST00000248668 MPRIPQ6WCQ1 1025 aa19.58■□□□□ 0.73
LRFN1-201ENST00000248668 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.73
LRFN1-201ENST00000248668 KCNQ3O43525 872 aa19.58■□□□□ 0.73
LRFN1-201ENST00000248668 ANXA1P04083 346 aa19.58■□□□□ 0.73
LRFN1-201ENST00000248668 DDX17Q92841 729 aaKnown RBP19.58■□□□□ 0.73
LRFN1-201ENST00000248668 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.73
LRFN1-201ENST00000248668 ANTXR1Q9H6X2 564 aa19.58■□□□□ 0.73
LRFN1-201ENST00000248668 FOXD4L1Q9NU39 408 aa19.58■□□□□ 0.73
LRFN1-201ENST00000248668 HDGFL1Q5TGJ6 251 aa19.58■□□□□ 0.72
LRFN1-201ENST00000248668 TSHZ3Q63HK5 1081 aa19.58■□□□□ 0.72
LRFN1-201ENST00000248668 HSCBQ8IWL3 235 aa19.58■□□□□ 0.72
LRFN1-201ENST00000248668 PHAXQ9H814 394 aaKnown RBP19.58■□□□□ 0.72
LRFN1-201ENST00000248668 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
LRFN1-201ENST00000248668 GCP02774 474 aa19.57■□□□□ 0.72
LRFN1-201ENST00000248668 GSE1Q14687 1217 aa19.57■□□□□ 0.72
LRFN1-201ENST00000248668 ADGRL3Q9HAR2 1447 aa19.56■□□□□ 0.72
LRFN1-201ENST00000248668 KIF24Q5T7B8 1368 aa19.56■□□□□ 0.72
LRFN1-201ENST00000248668 CCT4P50991 539 aaKnown RBP19.56■□□□□ 0.72
LRFN1-201ENST00000248668 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
LRFN1-201ENST00000248668 MARF1Q9Y4F3 1742 aaKnown RBP19.55■□□□□ 0.72
LRFN1-201ENST00000248668 NPHP4O75161 1426 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms