RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 PSME1Q06323 249 aa23.64■■□□□ 1.37
TUBA4A-201ENST00000248437 CHL1O00533 1208 aa23.63■■□□□ 1.37
TUBA4A-201ENST00000248437 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
TUBA4A-201ENST00000248437 C8orf58Q8NAV2 365 aa23.62■■□□□ 1.37
TUBA4A-201ENST00000248437 KIAA0232Q92628 1395 aa23.62■■□□□ 1.37
TUBA4A-201ENST00000248437 CRB1P82279 1406 aa23.61■■□□□ 1.37
TUBA4A-201ENST00000248437 C8orf34Q49A92 452 aa23.61■■□□□ 1.37
TUBA4A-201ENST00000248437 GAS2L2Q8NHY3 880 aa23.61■■□□□ 1.37
TUBA4A-201ENST00000248437 DDX17Q92841 729 aaKnown RBP23.61■■□□□ 1.37
TUBA4A-201ENST00000248437 KIF1AQ12756 1690 aa23.61■■□□□ 1.37
TUBA4A-201ENST00000248437 HDAC1Q13547 482 aaPredicted RBP23.61■■□□□ 1.37
TUBA4A-201ENST00000248437 ERICH6Q7L0X2 663 aa23.61■■□□□ 1.37
TUBA4A-201ENST00000248437 ZBTB40Q9NUA8 1239 aa23.6■■□□□ 1.37
TUBA4A-201ENST00000248437 LRRC37A3O60309 1634 aa23.6■■□□□ 1.37
TUBA4A-201ENST00000248437 MTHFSDQ2M296 383 aaKnown RBP23.59■■□□□ 1.37
TUBA4A-201ENST00000248437 MCM10Q7L590 875 aa23.59■■□□□ 1.37
TUBA4A-201ENST00000248437 CHMP4BQ9H444 224 aaKnown RBP23.59■■□□□ 1.37
TUBA4A-201ENST00000248437 NOP58Q9Y2X3 529 aaKnown RBP23.58■■□□□ 1.37
TUBA4A-201ENST00000248437 ELL2O00472 640 aaPredicted RBP23.58■■□□□ 1.36
TUBA4A-201ENST00000248437 HTATSF1O43719 755 aaKnown RBP23.58■■□□□ 1.36
TUBA4A-201ENST00000248437 KCNH5Q8NCM2 988 aa23.57■■□□□ 1.36
TUBA4A-201ENST00000248437 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
TUBA4A-201ENST00000248437 TRPM3Q9HCF6 1732 aaPredicted RBP23.57■■□□□ 1.36
TUBA4A-201ENST00000248437 ABCC4O15439 1325 aa23.57■■□□□ 1.36
TUBA4A-201ENST00000248437 IP6K1Q92551 441 aa23.55■■□□□ 1.36
TUBA4A-201ENST00000248437 API5Q9BZZ5 524 aaKnown RBP23.55■■□□□ 1.36
TUBA4A-201ENST00000248437 PDZRN3Q9UPQ7 1066 aa23.55■■□□□ 1.36
TUBA4A-201ENST00000248437 SLIT3O75094 1523 aa23.55■■□□□ 1.36
TUBA4A-201ENST00000248437 KRT28Q7Z3Y7 464 aa23.55■■□□□ 1.36
TUBA4A-201ENST00000248437 NPM2Q86SE8 214 aaKnown RBP23.55■■□□□ 1.36
TUBA4A-201ENST00000248437 PLEKHG5O94827 1062 aa23.52■■□□□ 1.36
TUBA4A-201ENST00000248437 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
TUBA4A-201ENST00000248437 BRINP3Q76B58 766 aa23.51■■□□□ 1.35
TUBA4A-201ENST00000248437 ZBTB47Q9UFB7 747 aaPredicted RBP23.51■■□□□ 1.35
TUBA4A-201ENST00000248437 ZBTB7BO15156 539 aaPredicted RBP23.51■■□□□ 1.35
TUBA4A-201ENST00000248437 SMC5Q8IY18 1101 aa23.51■■□□□ 1.35
TUBA4A-201ENST00000248437 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
TUBA4A-201ENST00000248437 GNAT3A8MTJ3 354 aa23.49■■□□□ 1.35
TUBA4A-201ENST00000248437 MYT1Q01538 1121 aa23.48■■□□□ 1.35
TUBA4A-201ENST00000248437 MAP3K5Q99683 1374 aa23.48■■□□□ 1.35
TUBA4A-201ENST00000248437 LTV1Q96GA3 475 aaPredicted RBP23.47■■□□□ 1.35
TUBA4A-201ENST00000248437 DDRGK1Q96HY6 314 aa23.47■■□□□ 1.35
TUBA4A-201ENST00000248437 TSPYL4Q9UJ04 414 aa23.47■■□□□ 1.35
TUBA4A-201ENST00000248437 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
TUBA4A-201ENST00000248437 KRT24Q2M2I5 525 aa23.47■■□□□ 1.35
TUBA4A-201ENST00000248437 ALS2Q96Q42 1657 aa23.46■■□□□ 1.35
TUBA4A-201ENST00000248437 USP19O94966 1318 aa23.46■■□□□ 1.35
TUBA4A-201ENST00000248437 PTPRCP08575 1304 aa23.46■■□□□ 1.35
TUBA4A-201ENST00000248437 NPHP3Q7Z494 1330 aa23.46■■□□□ 1.35
TUBA4A-201ENST00000248437 CACNA1FO60840 1977 aa23.46■■□□□ 1.35
TUBA4A-201ENST00000248437 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
TUBA4A-201ENST00000248437 BABAM1Q9NWV8 329 aa23.45■■□□□ 1.35
TUBA4A-201ENST00000248437 PXDNQ92626 1479 aa23.45■■□□□ 1.34
TUBA4A-201ENST00000248437 RGS12O14924 1447 aa23.45■■□□□ 1.34
TUBA4A-201ENST00000248437 GCP02774 474 aa23.44■■□□□ 1.34
TUBA4A-201ENST00000248437 CAMTA1Q9Y6Y1 1673 aa23.43■■□□□ 1.34
TUBA4A-201ENST00000248437 INTS3Q68E01 1043 aaKnown RBP23.43■■□□□ 1.34
TUBA4A-201ENST00000248437 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
TUBA4A-201ENST00000248437 NCAPD2Q15021 1401 aa23.43■■□□□ 1.34
TUBA4A-201ENST00000248437 SOS1Q07889 1333 aaPredicted RBP23.43■■□□□ 1.34
TUBA4A-201ENST00000248437 LMO7Q8WWI1 1683 aa23.42■■□□□ 1.34
TUBA4A-201ENST00000248437 MIS18AQ9NYP9 233 aa23.41■■□□□ 1.34
TUBA4A-201ENST00000248437 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
TUBA4A-201ENST00000248437 NBPF6Q5VWK0 638 aa23.41■■□□□ 1.34
TUBA4A-201ENST00000248437 NBPF4Q96M43 638 aa23.41■■□□□ 1.34
TUBA4A-201ENST00000248437 USHBP1Q8N6Y0 703 aa23.4■■□□□ 1.34
TUBA4A-201ENST00000248437 IL17REQ8NFR9 667 aa23.4■■□□□ 1.34
TUBA4A-201ENST00000248437 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
TUBA4A-201ENST00000248437 ZBTB7CA1YPR0 619 aa23.39■■□□□ 1.33
TUBA4A-201ENST00000248437 NUCB1Q02818 461 aa23.39■■□□□ 1.33
TUBA4A-201ENST00000248437 GCC1Q96CN9 775 aa23.39■■□□□ 1.33
TUBA4A-201ENST00000248437 TNS3Q68CZ2 1445 aa23.39■■□□□ 1.33
TUBA4A-201ENST00000248437 CEMIPQ8WUJ3 1361 aa23.38■■□□□ 1.33
TUBA4A-201ENST00000248437 TAF7Q15545 349 aaPredicted RBP23.37■■□□□ 1.33
TUBA4A-201ENST00000248437 SLC4A2P04920 1241 aa23.37■■□□□ 1.33
TUBA4A-201ENST00000248437 SPATA31A3Q5VYP0 1347 aa23.36■■□□□ 1.33
TUBA4A-201ENST00000248437 CABLES1Q8TDN4 633 aa23.36■■□□□ 1.33
TUBA4A-201ENST00000248437 RGPD5Q99666 1765 aa23.35■■□□□ 1.33
TUBA4A-201ENST00000248437 KDM3BQ7LBC6 1761 aa23.35■■□□□ 1.33
TUBA4A-201ENST00000248437 C1orf115Q9H7X2 142 aa23.34■■□□□ 1.33
TUBA4A-201ENST00000248437 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
TUBA4A-201ENST00000248437 N4BP2Q86UW6 1770 aaPredicted RBP23.33■■□□□ 1.33
TUBA4A-201ENST00000248437 CHD1LQ86WJ1 897 aa23.33■■□□□ 1.33
TUBA4A-201ENST00000248437 SIRT2Q8IXJ6 389 aa23.33■■□□□ 1.33
TUBA4A-201ENST00000248437 STK31Q9BXU1 1019 aa23.33■■□□□ 1.32
TUBA4A-201ENST00000248437 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
TUBA4A-201ENST00000248437 CCDC30Q5VVM6 783 aa23.32■■□□□ 1.32
TUBA4A-201ENST00000248437 ZC3H6P61129 1189 aaKnown RBP23.31■■□□□ 1.32
TUBA4A-201ENST00000248437 PLEKHO1Q53GL0 409 aaPredicted RBP23.31■■□□□ 1.32
TUBA4A-201ENST00000248437 ANKRD24Q8TF21 1146 aa23.31■■□□□ 1.32
TUBA4A-201ENST00000248437 LRRC59Q96AG4 307 aaKnown RBP23.31■■□□□ 1.32
TUBA4A-201ENST00000248437 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
TUBA4A-201ENST00000248437 OVOS2A0A0G2JMS6 1433 aa23.3■■□□□ 1.32
TUBA4A-201ENST00000248437 SEC24BO95487 1268 aa23.3■■□□□ 1.32
TUBA4A-201ENST00000248437 AKAP4Q5JQC9 854 aa23.3■■□□□ 1.32
TUBA4A-201ENST00000248437 ATP10DQ9P241 1426 aa23.3■■□□□ 1.32
TUBA4A-201ENST00000248437 NHSL1Q5SYE7 1610 aa23.3■■□□□ 1.32
TUBA4A-201ENST00000248437 ABCC6O95255 1503 aa23.29■■□□□ 1.32
TUBA4A-201ENST00000248437 CRYBG1Q9Y4K1 1723 aa23.28■■□□□ 1.32
TUBA4A-201ENST00000248437 CCT4P50991 539 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms