RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 EYA1Q99502 592 aa27.56■■■□□ 2
RNF39-201ENST00000244360 NLRP6P59044 892 aa27.55■■■□□ 2
RNF39-201ENST00000244360 MTHFSDQ2M296 383 aaKnown RBP27.55■■■□□ 2
RNF39-201ENST00000244360 NWD1Q149M9 1564 aa27.54■■■□□ 2
RNF39-201ENST00000244360 INTS3Q68E01 1043 aaKnown RBP27.53■■■□□ 2
RNF39-201ENST00000244360 ANKLE2Q86XL3 938 aa27.53■■■□□ 2
RNF39-201ENST00000244360 KRT24Q2M2I5 525 aa27.53■■■□□ 2
RNF39-201ENST00000244360 SIRT2Q8IXJ6 389 aa27.53■■■□□ 2
RNF39-201ENST00000244360 LRRC37A3O60309 1634 aa27.53■■■□□ 2
RNF39-201ENST00000244360 GAS2L2Q8NHY3 880 aa27.52■■■□□ 2
RNF39-201ENST00000244360 C1orf115Q9H7X2 142 aa27.52■■■□□ 2
RNF39-201ENST00000244360 FOXO3O43524 673 aa27.51■■□□□ 1.99
RNF39-201ENST00000244360 HOXC9P31274 260 aa27.51■■□□□ 1.99
RNF39-201ENST00000244360 LNPKQ9C0E8 428 aa27.51■■□□□ 1.99
RNF39-201ENST00000244360 FRAT2O75474 233 aaPredicted RBP27.5■■□□□ 1.99
RNF39-201ENST00000244360 PTPRCP08575 1304 aa27.5■■□□□ 1.99
RNF39-201ENST00000244360 ADAMTSL3P82987 1691 aa27.5■■□□□ 1.99
RNF39-201ENST00000244360 HTATSF1O43719 755 aaKnown RBP27.49■■□□□ 1.99
RNF39-201ENST00000244360 RTL1A6NKG5 1358 aa27.49■■□□□ 1.99
RNF39-201ENST00000244360 RTF1Q92541 710 aaKnown RBP27.48■■□□□ 1.99
RNF39-201ENST00000244360 PHF8Q9UPP1 1060 aa27.47■■□□□ 1.99
RNF39-201ENST00000244360 ADGRL3Q9HAR2 1447 aa27.46■■□□□ 1.99
RNF39-201ENST00000244360 ABTB2Q8N961 1025 aa27.46■■□□□ 1.99
RNF39-201ENST00000244360 BMP2KLQ5H9B9 411 aa27.45■■□□□ 1.99
RNF39-201ENST00000244360 ANKRD45Q5TZF3 282 aa27.44■■□□□ 1.98
RNF39-201ENST00000244360 TSPYL4Q9UJ04 414 aa27.44■■□□□ 1.98
RNF39-201ENST00000244360 ATP10DQ9P241 1426 aa27.44■■□□□ 1.98
RNF39-201ENST00000244360 NUTM2GQ5VZR2 741 aa27.43■■□□□ 1.98
RNF39-201ENST00000244360 C22orf23Q9BZE7 217 aa27.43■■□□□ 1.98
RNF39-201ENST00000244360 IL27Q8NEV9 243 aa27.42■■□□□ 1.98
RNF39-201ENST00000244360 NFAT5O94916 1531 aa27.42■■□□□ 1.98
RNF39-201ENST00000244360 MFAP1P55081 439 aaKnown RBP27.4■■□□□ 1.98
RNF39-201ENST00000244360 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
RNF39-201ENST00000244360 SETD1BQ9UPS6 1966 aaKnown RBP27.4■■□□□ 1.98
RNF39-201ENST00000244360 MSH6P52701 1360 aa27.39■■□□□ 1.98
RNF39-201ENST00000244360 GNAT3A8MTJ3 354 aa27.39■■□□□ 1.97
RNF39-201ENST00000244360 ANKRD44Q8N8A2 993 aa27.39■■□□□ 1.97
RNF39-201ENST00000244360 TBC1D2Q9BYX2 928 aa27.39■■□□□ 1.97
RNF39-201ENST00000244360 DCTPP1Q9H773 170 aa27.39■■□□□ 1.97
RNF39-201ENST00000244360 LTN1O94822 1766 aa27.38■■□□□ 1.97
RNF39-201ENST00000244360 MAP3K5Q99683 1374 aa27.38■■□□□ 1.97
RNF39-201ENST00000244360 SLC4A2P04920 1241 aa27.37■■□□□ 1.97
RNF39-201ENST00000244360 RPAP2Q8IXW5 612 aaPredicted RBP27.37■■□□□ 1.97
RNF39-201ENST00000244360 ANTXR1Q9H6X2 564 aa27.37■■□□□ 1.97
RNF39-201ENST00000244360 PHRF1Q9P1Y6 1649 aaKnown RBP27.37■■□□□ 1.97
RNF39-201ENST00000244360 NPHP4O75161 1426 aaPredicted RBP27.36■■□□□ 1.97
RNF39-201ENST00000244360 BABAM1Q9NWV8 329 aa27.36■■□□□ 1.97
RNF39-201ENST00000244360 SOS1Q07889 1333 aaPredicted RBP27.35■■□□□ 1.97
RNF39-201ENST00000244360 IP6K1Q92551 441 aa27.35■■□□□ 1.97
RNF39-201ENST00000244360 CEP85Q6P2H3 762 aa27.34■■□□□ 1.97
RNF39-201ENST00000244360 FAM208AQ9UK61 1670 aaKnown RBP27.34■■□□□ 1.97
RNF39-201ENST00000244360 RBM25P49756 843 aaKnown RBP27.33■■□□□ 1.97
RNF39-201ENST00000244360 SLKQ9H2G2 1235 aaPredicted RBP27.32■■□□□ 1.96
RNF39-201ENST00000244360 IL17REQ8NFR9 667 aa27.32■■□□□ 1.96
RNF39-201ENST00000244360 G2E3Q7L622 706 aa27.31■■□□□ 1.96
RNF39-201ENST00000244360 C14orf37Q86TY3 774 aa27.31■■□□□ 1.96
RNF39-201ENST00000244360 MEIS3Q99687 375 aa27.31■■□□□ 1.96
RNF39-201ENST00000244360 CCT4P50991 539 aaKnown RBP27.3■■□□□ 1.96
RNF39-201ENST00000244360 RBM33Q96EV2 1170 aaKnown RBP27.3■■□□□ 1.96
RNF39-201ENST00000244360 LTV1Q96GA3 475 aaPredicted RBP27.29■■□□□ 1.96
RNF39-201ENST00000244360 ESCO1Q5FWF5 840 aa27.29■■□□□ 1.96
RNF39-201ENST00000244360 KCNH5Q8NCM2 988 aa27.29■■□□□ 1.96
RNF39-201ENST00000244360 PSME1Q06323 249 aa27.28■■□□□ 1.96
RNF39-201ENST00000244360 MED1Q15648 1581 aaPredicted RBP27.28■■□□□ 1.96
RNF39-201ENST00000244360 PLEKHM2Q8IWE5 1019 aa27.28■■□□□ 1.96
RNF39-201ENST00000244360 STK31Q9BXU1 1019 aa27.28■■□□□ 1.96
RNF39-201ENST00000244360 BRPF3Q9ULD4 1205 aa27.28■■□□□ 1.96
RNF39-201ENST00000244360 TAF7Q15545 349 aaPredicted RBP27.27■■□□□ 1.96
RNF39-201ENST00000244360 CCDC30Q5VVM6 783 aa27.26■■□□□ 1.96
RNF39-201ENST00000244360 CEMIPQ8WUJ3 1361 aa27.26■■□□□ 1.96
RNF39-201ENST00000244360 SLIT3O75094 1523 aa27.26■■□□□ 1.95
RNF39-201ENST00000244360 CACNA1FO60840 1977 aa27.25■■□□□ 1.95
RNF39-201ENST00000244360 TBC1D9Q6ZT07 1266 aa27.25■■□□□ 1.95
RNF39-201ENST00000244360 USHBP1Q8N6Y0 703 aa27.24■■□□□ 1.95
RNF39-201ENST00000244360 N4BP2Q86UW6 1770 aaPredicted RBP27.24■■□□□ 1.95
RNF39-201ENST00000244360 GSPT1P15170 499 aaKnown RBP27.23■■□□□ 1.95
RNF39-201ENST00000244360 NBPF6Q5VWK0 638 aa27.23■■□□□ 1.95
RNF39-201ENST00000244360 NBPF4Q96M43 638 aa27.23■■□□□ 1.95
RNF39-201ENST00000244360 NCAPD2Q15021 1401 aa27.23■■□□□ 1.95
RNF39-201ENST00000244360 F6X3S4 739 aa27.22■■□□□ 1.95
RNF39-201ENST00000244360 FLIIQ13045 1269 aa27.22■■□□□ 1.95
RNF39-201ENST00000244360 CDC45O75419 566 aa27.22■■□□□ 1.95
RNF39-201ENST00000244360 PXDNLA1KZ92 1463 aa27.21■■□□□ 1.95
RNF39-201ENST00000244360 TTC22Q5TAA0 569 aa27.21■■□□□ 1.95
RNF39-201ENST00000244360 SNX21Q969T3 373 aa27.21■■□□□ 1.95
RNF39-201ENST00000244360 HMMRO75330 724 aa27.2■■□□□ 1.95
RNF39-201ENST00000244360 SLC4A10Q6U841 1118 aa27.2■■□□□ 1.94
RNF39-201ENST00000244360 LMO7Q8WWI1 1683 aa27.19■■□□□ 1.94
RNF39-201ENST00000244360 TRPM3Q9HCF6 1732 aaPredicted RBP27.19■■□□□ 1.94
RNF39-201ENST00000244360 CHMP5Q9NZZ3 219 aa27.19■■□□□ 1.94
RNF39-201ENST00000244360 EIF5BO60841 1220 aaKnown RBP27.18■■□□□ 1.94
RNF39-201ENST00000244360 L1TD1Q5T7N2 865 aaKnown RBP27.18■■□□□ 1.94
RNF39-201ENST00000244360 ORAI2Q96SN7 254 aa27.18■■□□□ 1.94
RNF39-201ENST00000244360 NCOA3Q9Y6Q9 1424 aa27.18■■□□□ 1.94
RNF39-201ENST00000244360 HSCBQ8IWL3 235 aa27.17■■□□□ 1.94
RNF39-201ENST00000244360 RTN4Q9NQC3 1192 aaKnown RBP27.17■■□□□ 1.94
RNF39-201ENST00000244360 ARHGEF25Q86VW2 580 aa27.17■■□□□ 1.94
RNF39-201ENST00000244360 KIF2CQ99661 725 aa27.17■■□□□ 1.94
RNF39-201ENST00000244360 KDM3BQ7LBC6 1761 aa27.17■■□□□ 1.94
RNF39-201ENST00000244360 RGPD2P0DJD1 1756 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms