RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 FMN2Q9NZ56 1722 aa17.96■□□□□ 0.47
HIF3A-202ENST00000244303 NCOA3Q9Y6Q9 1424 aa17.96■□□□□ 0.47
HIF3A-202ENST00000244303 MCM10Q7L590 875 aa17.96■□□□□ 0.47
HIF3A-202ENST00000244303 SOX12O15370 315 aa17.95■□□□□ 0.46
HIF3A-202ENST00000244303 TBC1D9Q6ZT07 1266 aa17.95■□□□□ 0.46
HIF3A-202ENST00000244303 SNX21Q969T3 373 aa17.95■□□□□ 0.46
HIF3A-202ENST00000244303 RGPD8O14715 1765 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-202ENST00000244303 RGS12O14924 1447 aa17.94■□□□□ 0.46
HIF3A-202ENST00000244303 CHL1O00533 1208 aa17.94■□□□□ 0.46
HIF3A-202ENST00000244303 RIMS1Q86UR5 1692 aaKnown RBP17.93■□□□□ 0.46
HIF3A-202ENST00000244303 INTS3Q68E01 1043 aaKnown RBP17.93■□□□□ 0.46
HIF3A-202ENST00000244303 KIF2CQ99661 725 aa17.93■□□□□ 0.46
HIF3A-202ENST00000244303 MAP3K19Q56UN5 1328 aa17.92■□□□□ 0.46
HIF3A-202ENST00000244303 ANKARQ7Z5J8 1434 aa17.92■□□□□ 0.46
HIF3A-202ENST00000244303 KIAA0232Q92628 1395 aa17.91■□□□□ 0.46
HIF3A-202ENST00000244303 DDIT3P35638 169 aa17.91■□□□□ 0.46
HIF3A-202ENST00000244303 HAP1P54257 671 aaPredicted RBP17.91■□□□□ 0.46
HIF3A-202ENST00000244303 DCTPP1Q9H773 170 aa17.91■□□□□ 0.46
HIF3A-202ENST00000244303 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
HIF3A-202ENST00000244303 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
HIF3A-202ENST00000244303 ANKLE2Q86XL3 938 aa17.91■□□□□ 0.46
HIF3A-202ENST00000244303 MSH6P52701 1360 aa17.9■□□□□ 0.46
HIF3A-202ENST00000244303 PLEKHM2Q8IWE5 1019 aa17.9■□□□□ 0.46
HIF3A-202ENST00000244303 CRB1P82279 1406 aa17.9■□□□□ 0.46
HIF3A-202ENST00000244303 CDC45O75419 566 aa17.89■□□□□ 0.46
HIF3A-202ENST00000244303 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
HIF3A-202ENST00000244303 ANKRD44Q8N8A2 993 aa17.89■□□□□ 0.45
HIF3A-202ENST00000244303 SBNO1A3KN83 1393 aa17.88■□□□□ 0.45
HIF3A-202ENST00000244303 EIF5BO60841 1220 aaKnown RBP17.88■□□□□ 0.45
HIF3A-202ENST00000244303 CD2BP2O95400 341 aaKnown RBP17.88■□□□□ 0.45
HIF3A-202ENST00000244303 L1TD1Q5T7N2 865 aaKnown RBP17.88■□□□□ 0.45
HIF3A-202ENST00000244303 PTPRCP08575 1304 aa17.88■□□□□ 0.45
HIF3A-202ENST00000244303 NLRP6P59044 892 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 ARHGEF10O15013 1369 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 FLT4P35916 1363 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 FOXO3O43524 673 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 TRAK2O60296 914 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 AMPHP49418 695 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 CEP85Q6P2H3 762 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
HIF3A-202ENST00000244303 GZF1Q9H116 711 aaPredicted RBP17.87■□□□□ 0.45
HIF3A-202ENST00000244303 MIS18AQ9NYP9 233 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 RTL1A6NKG5 1358 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 PIK3C2AO00443 1686 aa17.87■□□□□ 0.45
HIF3A-202ENST00000244303 RPAP2Q8IXW5 612 aaPredicted RBP17.86■□□□□ 0.45
HIF3A-202ENST00000244303 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
HIF3A-202ENST00000244303 TTC22Q5TAA0 569 aa17.86■□□□□ 0.45
HIF3A-202ENST00000244303 SLC4A2P04920 1241 aa17.85■□□□□ 0.45
HIF3A-202ENST00000244303 MTHFSDQ2M296 383 aaKnown RBP17.85■□□□□ 0.45
HIF3A-202ENST00000244303 MEIS3Q99687 375 aa17.85■□□□□ 0.45
HIF3A-202ENST00000244303 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
HIF3A-202ENST00000244303 DDX11L8A8MPP1 907 aa17.84■□□□□ 0.45
HIF3A-202ENST00000244303 K7ELQ4 463 aaPredicted RBP17.84■□□□□ 0.45
HIF3A-202ENST00000244303 FAM43AQ8N2R8 423 aa17.84■□□□□ 0.45
HIF3A-202ENST00000244303 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
HIF3A-202ENST00000244303 ARXQ96QS3 562 aa17.84■□□□□ 0.45
HIF3A-202ENST00000244303 CHD2O14647 1828 aaKnown RBP17.83■□□□□ 0.45
HIF3A-202ENST00000244303 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.45
HIF3A-202ENST00000244303 TNPO1Q92973 898 aaKnown RBP17.83■□□□□ 0.45
HIF3A-202ENST00000244303 EYA1Q99502 592 aa17.83■□□□□ 0.45
HIF3A-202ENST00000244303 CIZ1Q9ULV3 898 aaPredicted RBP17.83■□□□□ 0.45
HIF3A-202ENST00000244303 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
HIF3A-202ENST00000244303 TSPYL4Q9UJ04 414 aa17.83■□□□□ 0.44
HIF3A-202ENST00000244303 ZNF142P52746 1687 aaPredicted RBP17.82■□□□□ 0.44
HIF3A-202ENST00000244303 GOLGA6L3A6NEY3 463 aa17.82■□□□□ 0.44
HIF3A-202ENST00000244303 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
HIF3A-202ENST00000244303 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
HIF3A-202ENST00000244303 RBM33Q96EV2 1170 aaKnown RBP17.82■□□□□ 0.44
HIF3A-202ENST00000244303 KDRP35968 1356 aa17.82■□□□□ 0.44
HIF3A-202ENST00000244303 FSD2A1L4K1 749 aa17.82■□□□□ 0.44
HIF3A-202ENST00000244303 APBB1O00213 710 aa17.82■□□□□ 0.44
HIF3A-202ENST00000244303 SMARCA5O60264 1052 aaPredicted RBP17.82■□□□□ 0.44
HIF3A-202ENST00000244303 PHF8Q9UPP1 1060 aa17.82■□□□□ 0.44
HIF3A-202ENST00000244303 ADAMTSL3P82987 1691 aa17.82■□□□□ 0.44
HIF3A-202ENST00000244303 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
HIF3A-202ENST00000244303 RAB3GAP1Q15042 981 aa17.81■□□□□ 0.44
HIF3A-202ENST00000244303 G2E3Q7L622 706 aa17.81■□□□□ 0.44
HIF3A-202ENST00000244303 AK9Q5TCS8 1911 aa17.8■□□□□ 0.44
HIF3A-202ENST00000244303 F6X3S4 739 aa17.79■□□□□ 0.44
HIF3A-202ENST00000244303 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
HIF3A-202ENST00000244303 HOXC9P31274 260 aa17.79■□□□□ 0.44
HIF3A-202ENST00000244303 SLC4A10Q6U841 1118 aa17.79■□□□□ 0.44
HIF3A-202ENST00000244303 LRRC37A3O60309 1634 aa17.79■□□□□ 0.44
HIF3A-202ENST00000244303 MARF1Q9Y4F3 1742 aaKnown RBP17.79■□□□□ 0.44
HIF3A-202ENST00000244303 FAM208AQ9UK61 1670 aaKnown RBP17.79■□□□□ 0.44
HIF3A-202ENST00000244303 SDSP20132 328 aa17.78■□□□□ 0.44
HIF3A-202ENST00000244303 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
HIF3A-202ENST00000244303 GBP4Q96PP9 640 aa17.78■□□□□ 0.44
HIF3A-202ENST00000244303 SETD1BQ9UPS6 1966 aaKnown RBP17.78■□□□□ 0.44
HIF3A-202ENST00000244303 C14orf37Q86TY3 774 aa17.77■□□□□ 0.44
HIF3A-202ENST00000244303 USP26Q9BXU7 913 aa17.77■□□□□ 0.44
HIF3A-202ENST00000244303 USP54Q70EL1 1684 aa17.77■□□□□ 0.43
HIF3A-202ENST00000244303 HMMRO75330 724 aa17.76■□□□□ 0.43
HIF3A-202ENST00000244303 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
HIF3A-202ENST00000244303 RABEP1Q15276 862 aa17.76■□□□□ 0.43
HIF3A-202ENST00000244303 CACNA1FO60840 1977 aa17.75■□□□□ 0.43
HIF3A-202ENST00000244303 ADGRL3Q9HAR2 1447 aa17.75■□□□□ 0.43
HIF3A-202ENST00000244303 PANK2Q9BZ23 570 aa17.75■□□□□ 0.43
HIF3A-202ENST00000244303 NPHP4O75161 1426 aaPredicted RBP17.75■□□□□ 0.43
HIF3A-202ENST00000244303 ESCO1Q5FWF5 840 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms