RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
SSPN-201ENST00000242729 TMEM2Q9UHN6 1383 aa20.92■□□□□ 0.94
SSPN-201ENST00000242729 CDC45O75419 566 aa20.92■□□□□ 0.94
SSPN-201ENST00000242729 CEP85Q6P2H3 762 aa20.92■□□□□ 0.94
SSPN-201ENST00000242729 PIK3R4Q99570 1358 aa20.92■□□□□ 0.94
SSPN-201ENST00000242729 CHMP4BQ9H444 224 aaKnown RBP20.91■□□□□ 0.94
SSPN-201ENST00000242729 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
SSPN-201ENST00000242729 DCTPP1Q9H773 170 aa20.91■□□□□ 0.94
SSPN-201ENST00000242729 USHBP1Q8N6Y0 703 aa20.91■□□□□ 0.94
SSPN-201ENST00000242729 SSFA2P28290 1259 aa20.9■□□□□ 0.94
SSPN-201ENST00000242729 EXOC6BQ9Y2D4 811 aa20.9■□□□□ 0.94
SSPN-201ENST00000242729 INTS3Q68E01 1043 aaKnown RBP20.89■□□□□ 0.93
SSPN-201ENST00000242729 EIF5BO60841 1220 aaKnown RBP20.88■□□□□ 0.93
SSPN-201ENST00000242729 TTC22Q5TAA0 569 aa20.88■□□□□ 0.93
SSPN-201ENST00000242729 AGLP35573 1532 aa20.88■□□□□ 0.93
SSPN-201ENST00000242729 SDSP20132 328 aa20.88■□□□□ 0.93
SSPN-201ENST00000242729 NLRP6P59044 892 aa20.88■□□□□ 0.93
SSPN-201ENST00000242729 ANKRD44Q8N8A2 993 aa20.88■□□□□ 0.93
SSPN-201ENST00000242729 EYA1Q99502 592 aa20.88■□□□□ 0.93
SSPN-201ENST00000242729 KNDC1Q76NI1 1749 aa20.88■□□□□ 0.93
SSPN-201ENST00000242729 K7ELQ4 463 aaPredicted RBP20.87■□□□□ 0.93
SSPN-201ENST00000242729 SNX21Q969T3 373 aa20.86■□□□□ 0.93
SSPN-201ENST00000242729 ADAMTS13Q76LX8 1427 aa20.86■□□□□ 0.93
SSPN-201ENST00000242729 CHAMP1Q96JM3 812 aa20.86■□□□□ 0.93
SSPN-201ENST00000242729 RRAGDQ9NQL2 400 aaPredicted RBP20.86■□□□□ 0.93
SSPN-201ENST00000242729 RGS12O14924 1447 aa20.85■□□□□ 0.93
SSPN-201ENST00000242729 RIMS1Q86UR5 1692 aaKnown RBP20.85■□□□□ 0.93
SSPN-201ENST00000242729 RTL1A6NKG5 1358 aa20.85■□□□□ 0.93
SSPN-201ENST00000242729 DDIT3P35638 169 aa20.85■□□□□ 0.93
SSPN-201ENST00000242729 FOXD4L5Q5VV16 416 aaPredicted RBP20.85■□□□□ 0.93
SSPN-201ENST00000242729 FOXD4L4Q8WXT5 416 aaPredicted RBP20.85■□□□□ 0.93
SSPN-201ENST00000242729 USP6P35125 1406 aa20.85■□□□□ 0.93
SSPN-201ENST00000242729 L1TD1Q5T7N2 865 aaKnown RBP20.85■□□□□ 0.93
SSPN-201ENST00000242729 PTPRUQ92729 1446 aa20.84■□□□□ 0.93
SSPN-201ENST00000242729 PKP1Q13835 747 aa20.84■□□□□ 0.93
SSPN-201ENST00000242729 ATP10DQ9P241 1426 aa20.84■□□□□ 0.93
SSPN-201ENST00000242729 NOL8Q76FK4 1167 aaKnown RBP20.84■□□□□ 0.93
SSPN-201ENST00000242729 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.83■□□□□ 0.93
SSPN-201ENST00000242729 FKBP5Q13451 457 aaPredicted RBP20.83■□□□□ 0.93
SSPN-201ENST00000242729 PLEKHG3A1L390 1219 aa20.83■□□□□ 0.92
SSPN-201ENST00000242729 PRKCSHP14314 528 aaPredicted RBP20.83■□□□□ 0.92
SSPN-201ENST00000242729 EID1Q9Y6B2 187 aa20.83■□□□□ 0.92
SSPN-201ENST00000242729 C3P01024 1663 aa20.82■□□□□ 0.92
SSPN-201ENST00000242729 MON2Q7Z3U7 1717 aa20.81■□□□□ 0.92
SSPN-201ENST00000242729 OVOS2A0A0J9YW53 1432 aa20.81■□□□□ 0.92
SSPN-201ENST00000242729 OVOS2Q6IE36 1432 aa20.81■□□□□ 0.92
SSPN-201ENST00000242729 AK9Q5TCS8 1911 aa20.81■□□□□ 0.92
SSPN-201ENST00000242729 GAS2L3Q86XJ1 694 aa20.81■□□□□ 0.92
SSPN-201ENST00000242729 PEAK1Q9H792 1746 aa20.81■□□□□ 0.92
SSPN-201ENST00000242729 DDX11L8A8MPP1 907 aa20.8■□□□□ 0.92
SSPN-201ENST00000242729 RAB3GAP1Q15042 981 aa20.8■□□□□ 0.92
SSPN-201ENST00000242729 ITSN1Q15811 1721 aa20.8■□□□□ 0.92
SSPN-201ENST00000242729 RPAP2Q8IXW5 612 aaPredicted RBP20.8■□□□□ 0.92
SSPN-201ENST00000242729 USP26Q9BXU7 913 aa20.8■□□□□ 0.92
SSPN-201ENST00000242729 CRB1P82279 1406 aa20.8■□□□□ 0.92
SSPN-201ENST00000242729 NCLP19338 710 aaKnown RBP20.8■□□□□ 0.92
SSPN-201ENST00000242729 TECPR2O15040 1411 aa20.79■□□□□ 0.92
SSPN-201ENST00000242729 ZGPATQ8N5A5 531 aaKnown RBP20.79■□□□□ 0.92
SSPN-201ENST00000242729 SIRT1Q96EB6 747 aa20.79■□□□□ 0.92
SSPN-201ENST00000242729 PNMA6EA0A0J9YXQ4 647 aa20.79■□□□□ 0.92
SSPN-201ENST00000242729 FSD2A1L4K1 749 aa20.79■□□□□ 0.92
SSPN-201ENST00000242729 NCOA3Q9Y6Q9 1424 aa20.79■□□□□ 0.92
SSPN-201ENST00000242729 ABTB2Q8N961 1025 aa20.78■□□□□ 0.92
SSPN-201ENST00000242729 GBP4Q96PP9 640 aa20.78■□□□□ 0.92
SSPN-201ENST00000242729 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
SSPN-201ENST00000242729 EIF2S2P20042 333 aaKnown RBP20.77■□□□□ 0.92
SSPN-201ENST00000242729 RILPL2Q969X0 211 aa20.77■□□□□ 0.92
SSPN-201ENST00000242729 PTPRCP08575 1304 aa20.77■□□□□ 0.91
SSPN-201ENST00000242729 MAP4K4O95819 1239 aaPredicted RBP20.76■□□□□ 0.91
SSPN-201ENST00000242729 KCNA6P17658 529 aa20.76■□□□□ 0.91
SSPN-201ENST00000242729 FAM43AQ8N2R8 423 aa20.76■□□□□ 0.91
SSPN-201ENST00000242729 IL1RAPL2Q9NP60 686 aa20.76■□□□□ 0.91
SSPN-201ENST00000242729 FLIIQ13045 1269 aa20.76■□□□□ 0.91
SSPN-201ENST00000242729 GRPEL1Q9HAV7 217 aa20.76■□□□□ 0.91
SSPN-201ENST00000242729 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
SSPN-201ENST00000242729 TRIM6-TRIM34B2RNG4 842 aa20.75■□□□□ 0.91
SSPN-201ENST00000242729 ANXA1P04083 346 aa20.75■□□□□ 0.91
SSPN-201ENST00000242729 MCTP1Q6DN14 999 aa20.75■□□□□ 0.91
SSPN-201ENST00000242729 AKAP12Q02952 1782 aa20.75■□□□□ 0.91
SSPN-201ENST00000242729 REREQ9P2R6 1566 aa20.75■□□□□ 0.91
SSPN-201ENST00000242729 PHAXQ9H814 394 aaKnown RBP20.75■□□□□ 0.91
SSPN-201ENST00000242729 FOXD4L6Q3SYB3 417 aaPredicted RBP20.74■□□□□ 0.91
SSPN-201ENST00000242729 FOXD4L3Q6VB84 417 aaPredicted RBP20.74■□□□□ 0.91
SSPN-201ENST00000242729 PDE1AP54750 535 aa20.74■□□□□ 0.91
SSPN-201ENST00000242729 IL17REQ8NFR9 667 aa20.74■□□□□ 0.91
SSPN-201ENST00000242729 LRRFIP2Q9Y608 721 aaKnown RBP20.74■□□□□ 0.91
SSPN-201ENST00000242729 FLT4P35916 1363 aa20.73■□□□□ 0.91
SSPN-201ENST00000242729 KIAA0232Q92628 1395 aa20.73■□□□□ 0.91
SSPN-201ENST00000242729 HAP1P54257 671 aaPredicted RBP20.73■□□□□ 0.91
SSPN-201ENST00000242729 TPRNQ4KMQ1 711 aa20.73■□□□□ 0.91
SSPN-201ENST00000242729 GNAI2P04899 355 aa20.73■□□□□ 0.91
SSPN-201ENST00000242729 XPCQ01831 940 aaPredicted RBP20.73■□□□□ 0.91
SSPN-201ENST00000242729 DDX49Q9Y6V7 483 aaKnown RBP20.73■□□□□ 0.91
SSPN-201ENST00000242729 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
SSPN-201ENST00000242729 HMMRO75330 724 aa20.72■□□□□ 0.91
SSPN-201ENST00000242729 CASC1Q6TDU7 716 aa20.72■□□□□ 0.91
SSPN-201ENST00000242729 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
SSPN-201ENST00000242729 DTNBO60941 627 aa20.72■□□□□ 0.91
SSPN-201ENST00000242729 HOXC9P31274 260 aa20.72■□□□□ 0.91
SSPN-201ENST00000242729 RABEP1Q15276 862 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms