RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 NME9Q86XW9 330 aa19.43■□□□□ 0.7
CTSD-201ENST00000236671 ROBO1Q9Y6N7 1651 aa19.43■□□□□ 0.7
CTSD-201ENST00000236671 C1orf167Q5SNV9 1468 aa19.43■□□□□ 0.7
CTSD-201ENST00000236671 ESCO1Q5FWF5 840 aa19.43■□□□□ 0.7
CTSD-201ENST00000236671 ANKRD45Q5TZF3 282 aa19.43■□□□□ 0.7
CTSD-201ENST00000236671 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
CTSD-201ENST00000236671 SIRT2Q8IXJ6 389 aa19.42■□□□□ 0.7
CTSD-201ENST00000236671 DLG5Q8TDM6 1919 aa19.42■□□□□ 0.7
CTSD-201ENST00000236671 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
CTSD-201ENST00000236671 ZRANB1Q9UGI0 708 aa19.41■□□□□ 0.7
CTSD-201ENST00000236671 MON2Q7Z3U7 1717 aa19.41■□□□□ 0.7
CTSD-201ENST00000236671 KIF2CQ99661 725 aa19.4■□□□□ 0.7
CTSD-201ENST00000236671 DCCP43146 1447 aa19.4■□□□□ 0.7
CTSD-201ENST00000236671 GOLGA6L3A6NEY3 463 aa19.4■□□□□ 0.7
CTSD-201ENST00000236671 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
CTSD-201ENST00000236671 TRAK2O60296 914 aa19.4■□□□□ 0.7
CTSD-201ENST00000236671 TWISTNBQ3B726 338 aaPredicted RBP19.4■□□□□ 0.7
CTSD-201ENST00000236671 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
CTSD-201ENST00000236671 BRINP3Q76B58 766 aa19.39■□□□□ 0.69
CTSD-201ENST00000236671 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.39■□□□□ 0.69
CTSD-201ENST00000236671 TOM1O60784 492 aa19.39■□□□□ 0.69
CTSD-201ENST00000236671 XRCC6P12956 609 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTSD-201ENST00000236671 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.69
CTSD-201ENST00000236671 C8orf58Q8NAV2 365 aa19.39■□□□□ 0.69
CTSD-201ENST00000236671 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
CTSD-201ENST00000236671 DDX11L8A8MPP1 907 aa19.37■□□□□ 0.69
CTSD-201ENST00000236671 FOXO3O43524 673 aa19.37■□□□□ 0.69
CTSD-201ENST00000236671 TBC1D9Q6ZT07 1266 aa19.37■□□□□ 0.69
CTSD-201ENST00000236671 TOPAZ1Q8N9V7 1692 aa19.37■□□□□ 0.69
CTSD-201ENST00000236671 API5Q9BZZ5 524 aaKnown RBP19.37■□□□□ 0.69
CTSD-201ENST00000236671 NRKQ7Z2Y5 1582 aa19.36■□□□□ 0.69
CTSD-201ENST00000236671 COG3Q96JB2 828 aa19.36■□□□□ 0.69
CTSD-201ENST00000236671 CIZ1Q9ULV3 898 aaPredicted RBP19.36■□□□□ 0.69
CTSD-201ENST00000236671 KIF24Q5T7B8 1368 aa19.36■□□□□ 0.69
CTSD-201ENST00000236671 AKAP12Q02952 1782 aa19.35■□□□□ 0.69
CTSD-201ENST00000236671 FAM83GA6ND36 823 aa19.35■□□□□ 0.69
CTSD-201ENST00000236671 RRS1Q15050 365 aaKnown RBP19.35■□□□□ 0.69
CTSD-201ENST00000236671 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
CTSD-201ENST00000236671 CD2BP2O95400 341 aaKnown RBP19.34■□□□□ 0.69
CTSD-201ENST00000236671 PLEKHG5O94827 1062 aa19.33■□□□□ 0.69
CTSD-201ENST00000236671 TNPO1Q92973 898 aaKnown RBP19.33■□□□□ 0.69
CTSD-201ENST00000236671 ARXQ96QS3 562 aa19.33■□□□□ 0.69
CTSD-201ENST00000236671 ITSN1Q15811 1721 aa19.33■□□□□ 0.69
CTSD-201ENST00000236671 RRAGDQ9NQL2 400 aaPredicted RBP19.33■□□□□ 0.68
CTSD-201ENST00000236671 PHF8Q9UPP1 1060 aa19.33■□□□□ 0.68
CTSD-201ENST00000236671 CCDC61Q9Y6R9 512 aa19.33■□□□□ 0.68
CTSD-201ENST00000236671 DCTN1Q14203 1278 aa19.32■□□□□ 0.68
CTSD-201ENST00000236671 RAB3GAP1Q15042 981 aa19.32■□□□□ 0.68
CTSD-201ENST00000236671 PANK2Q9BZ23 570 aa19.31■□□□□ 0.68
CTSD-201ENST00000236671 CDC45O75419 566 aa19.31■□□□□ 0.68
CTSD-201ENST00000236671 GSPT1P15170 499 aaKnown RBP19.31■□□□□ 0.68
CTSD-201ENST00000236671 ACEP12821 1306 aa19.31■□□□□ 0.68
CTSD-201ENST00000236671 RGS12O14924 1447 aa19.3■□□□□ 0.68
CTSD-201ENST00000236671 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
CTSD-201ENST00000236671 K7ELQ4 463 aaPredicted RBP19.3■□□□□ 0.68
CTSD-201ENST00000236671 DCTPP1Q9H773 170 aa19.3■□□□□ 0.68
CTSD-201ENST00000236671 ATP10DQ9P241 1426 aa19.29■□□□□ 0.68
CTSD-201ENST00000236671 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
CTSD-201ENST00000236671 PLEKHM2Q8IWE5 1019 aa19.29■□□□□ 0.68
CTSD-201ENST00000236671 MRE11P49959 708 aa19.28■□□□□ 0.68
CTSD-201ENST00000236671 NGDNQ8NEJ9 315 aaKnown RBP19.28■□□□□ 0.68
CTSD-201ENST00000236671 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
CTSD-201ENST00000236671 AEBP1Q8IUX7 1158 aa19.28■□□□□ 0.68
CTSD-201ENST00000236671 PHLPP1O60346 1717 aa19.27■□□□□ 0.68
CTSD-201ENST00000236671 NHSL1Q5SYE7 1610 aa19.27■□□□□ 0.68
CTSD-201ENST00000236671 HSPA1LP34931 641 aa19.27■□□□□ 0.68
CTSD-201ENST00000236671 GBP4Q96PP9 640 aa19.27■□□□□ 0.68
CTSD-201ENST00000236671 EIF4A2Q14240 407 aaKnown RBP19.26■□□□□ 0.67
CTSD-201ENST00000236671 ISY1Q9ULR0 285 aaKnown RBP19.26■□□□□ 0.67
CTSD-201ENST00000236671 TTC22Q5TAA0 569 aa19.25■□□□□ 0.67
CTSD-201ENST00000236671 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
CTSD-201ENST00000236671 NUTM2GQ5VZR2 741 aa19.25■□□□□ 0.67
CTSD-201ENST00000236671 ANKRD44Q8N8A2 993 aa19.25■□□□□ 0.67
CTSD-201ENST00000236671 GRPEL1Q9HAV7 217 aa19.25■□□□□ 0.67
CTSD-201ENST00000236671 KIF1AQ12756 1690 aa19.25■□□□□ 0.67
CTSD-201ENST00000236671 CHL1O00533 1208 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
CTSD-201ENST00000236671 SULT6B1Q6IMI4 303 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 FOXD4L1Q9NU39 408 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 OVOS2A0A0J9YW53 1432 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 OVOS2Q6IE36 1432 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 PSME1Q06323 249 aa19.24■□□□□ 0.67
CTSD-201ENST00000236671 PXDNQ92626 1479 aa19.23■□□□□ 0.67
CTSD-201ENST00000236671 PLEKHG3A1L390 1219 aa19.23■□□□□ 0.67
CTSD-201ENST00000236671 RGPD1P0DJD0 1748 aa19.23■□□□□ 0.67
CTSD-201ENST00000236671 COL16A1Q07092 1604 aaPredicted RBP19.23■□□□□ 0.67
CTSD-201ENST00000236671 PEAK1Q9H792 1746 aa19.22■□□□□ 0.67
CTSD-201ENST00000236671 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
CTSD-201ENST00000236671 CEP85Q6P2H3 762 aa19.22■□□□□ 0.67
CTSD-201ENST00000236671 LMOD2Q6P5Q4 547 aa19.22■□□□□ 0.67
CTSD-201ENST00000236671 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
CTSD-201ENST00000236671 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
CTSD-201ENST00000236671 EIF5BO60841 1220 aaKnown RBP19.22■□□□□ 0.67
CTSD-201ENST00000236671 PTMSP20962 102 aa19.22■□□□□ 0.67
CTSD-201ENST00000236671 C16orf71Q8IYS4 520 aaPredicted RBP19.22■□□□□ 0.67
CTSD-201ENST00000236671 RTL1A6NKG5 1358 aa19.22■□□□□ 0.67
CTSD-201ENST00000236671 SKOR2Q2VWA4 1001 aaPredicted RBP19.21■□□□□ 0.67
CTSD-201ENST00000236671 RPAP2Q8IXW5 612 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms