RNA–Protein interactions for RNA: ENST00000222812.7

STX1A-201, Transcript of syntaxin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX1A, Length 2,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-201ENST00000222812 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.73
STX1A-201ENST00000222812 NRAPQ86VF7 1730 aa19.58■□□□□ 0.72
STX1A-201ENST00000222812 NEFLP07196 543 aa19.57■□□□□ 0.72
STX1A-201ENST00000222812 FKBP8Q14318 412 aa19.57■□□□□ 0.72
STX1A-201ENST00000222812 USP35Q9P2H5 1018 aa19.57■□□□□ 0.72
STX1A-201ENST00000222812 LRP6O75581 1613 aa19.57■□□□□ 0.72
STX1A-201ENST00000222812 RAPGEF4Q8WZA2 1011 aa19.56■□□□□ 0.72
STX1A-201ENST00000222812 TSR2Q969E8 191 aaKnown RBP19.56■□□□□ 0.72
STX1A-201ENST00000222812 LMOD3Q0VAK6 560 aa19.55■□□□□ 0.72
STX1A-201ENST00000222812 CARD10Q9BWT7 1032 aa19.55■□□□□ 0.72
STX1A-201ENST00000222812 LAS1LQ9Y4W2 734 aaKnown RBP19.55■□□□□ 0.72
STX1A-201ENST00000222812 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
STX1A-201ENST00000222812 TSHZ2Q9NRE2 1034 aa19.55■□□□□ 0.72
STX1A-201ENST00000222812 CRB1P82279 1406 aa19.54■□□□□ 0.72
STX1A-201ENST00000222812 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
STX1A-201ENST00000222812 TATP17735 454 aaPredicted RBP19.54■□□□□ 0.72
STX1A-201ENST00000222812 ZNF530Q6P9A1 599 aaPredicted RBP19.54■□□□□ 0.72
STX1A-201ENST00000222812 PARP4Q9UKK3 1724 aaKnown RBP19.53■□□□□ 0.72
STX1A-201ENST00000222812 NWD2Q9ULI1 1742 aa19.53■□□□□ 0.72
STX1A-201ENST00000222812 MAP3K5Q99683 1374 aa19.53■□□□□ 0.72
STX1A-201ENST00000222812 PKD1L3Q7Z443 1732 aa19.53■□□□□ 0.72
STX1A-201ENST00000222812 AMOTQ4VCS5 1084 aa19.53■□□□□ 0.72
STX1A-201ENST00000222812 C8orf37Q96NL8 207 aa19.53■□□□□ 0.72
STX1A-201ENST00000222812 IL16Q14005 1332 aa19.52■□□□□ 0.72
STX1A-201ENST00000222812 SPATA31A6Q5VVP1 1343 aa19.52■□□□□ 0.72
STX1A-201ENST00000222812 FANCIQ9NVI1 1328 aa19.52■□□□□ 0.72
STX1A-201ENST00000222812 IL17REQ8NFR9 667 aa19.52■□□□□ 0.72
STX1A-201ENST00000222812 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
STX1A-201ENST00000222812 SLIT2O94813 1529 aa19.52■□□□□ 0.71
STX1A-201ENST00000222812 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
STX1A-201ENST00000222812 LGR6Q9HBX8 967 aa19.5■□□□□ 0.71
STX1A-201ENST00000222812 LRRC37A3O60309 1634 aa19.5■□□□□ 0.71
STX1A-201ENST00000222812 SHANK3Q9BYB0 1731 aa19.5■□□□□ 0.71
STX1A-201ENST00000222812 MPRIPQ6WCQ1 1025 aa19.5■□□□□ 0.71
STX1A-201ENST00000222812 NGLY1Q96IV0 654 aa19.5■□□□□ 0.71
STX1A-201ENST00000222812 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
STX1A-201ENST00000222812 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
STX1A-201ENST00000222812 AKAP4Q5JQC9 854 aa19.49■□□□□ 0.71
STX1A-201ENST00000222812 OVOS2A0A0G2JMS6 1433 aa19.49■□□□□ 0.71
STX1A-201ENST00000222812 WNK3Q9BYP7 1800 aa19.49■□□□□ 0.71
STX1A-201ENST00000222812 HTATSF1O43719 755 aaKnown RBP19.48■□□□□ 0.71
STX1A-201ENST00000222812 IL2RBP14784 551 aa19.48■□□□□ 0.71
STX1A-201ENST00000222812 IFT57Q9NWB7 429 aa19.48■□□□□ 0.71
STX1A-201ENST00000222812 MIS18AQ9NYP9 233 aa19.48■□□□□ 0.71
STX1A-201ENST00000222812 CALD1Q05682 793 aaKnown RBP19.48■□□□□ 0.71
STX1A-201ENST00000222812 EXOSC9Q06265 439 aaKnown RBP19.48■□□□□ 0.71
STX1A-201ENST00000222812 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
STX1A-201ENST00000222812 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
STX1A-201ENST00000222812 GNAI1P63096 354 aa19.47■□□□□ 0.71
STX1A-201ENST00000222812 C1orf141Q5JVX7 400 aa19.47■□□□□ 0.71
STX1A-201ENST00000222812 SPG7Q9UQ90 795 aa19.47■□□□□ 0.71
STX1A-201ENST00000222812 CYP27B1O15528 508 aa19.47■□□□□ 0.71
STX1A-201ENST00000222812 SCN11AQ9UI33 1791 aa19.46■□□□□ 0.71
STX1A-201ENST00000222812 BCL9LQ86UU0 1499 aa19.46■□□□□ 0.71
STX1A-201ENST00000222812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.46■□□□□ 0.71
STX1A-201ENST00000222812 PHKG2P15735 406 aa19.45■□□□□ 0.7
STX1A-201ENST00000222812 ZCRB1Q8TBF4 217 aaKnown RBP19.45■□□□□ 0.7
STX1A-201ENST00000222812 SPATA31A1Q5TZJ5 1347 aa19.45■□□□□ 0.7
STX1A-201ENST00000222812 CEMIPQ8WUJ3 1361 aa19.45■□□□□ 0.7
STX1A-201ENST00000222812 CHL1O00533 1208 aa19.44■□□□□ 0.7
STX1A-201ENST00000222812 RNMTO43148 476 aaKnown RBP19.44■□□□□ 0.7
STX1A-201ENST00000222812 IRX6P78412 446 aaPredicted RBP19.44■□□□□ 0.7
STX1A-201ENST00000222812 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
STX1A-201ENST00000222812 ADAMTS7Q9UKP4 1686 aa19.44■□□□□ 0.7
STX1A-201ENST00000222812 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
STX1A-201ENST00000222812 FNBP4Q8N3X1 1017 aaPredicted RBP19.44■□□□□ 0.7
STX1A-201ENST00000222812 CCDC9Q9Y3X0 531 aaKnown RBP19.44■□□□□ 0.7
STX1A-201ENST00000222812 DISP2A7MBM2 1401 aa19.43■□□□□ 0.7
STX1A-201ENST00000222812 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
STX1A-201ENST00000222812 SIPA1L3O60292 1781 aaPredicted RBP19.42■□□□□ 0.7
STX1A-201ENST00000222812 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
STX1A-201ENST00000222812 SPATA31A5Q5VU36 1347 aa19.42■□□□□ 0.7
STX1A-201ENST00000222812 SPATA31A7Q8IWB4 1347 aa19.42■□□□□ 0.7
STX1A-201ENST00000222812 PLEKHG2Q9H7P9 1386 aa19.42■□□□□ 0.7
STX1A-201ENST00000222812 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
STX1A-201ENST00000222812 KRT24Q2M2I5 525 aa19.41■□□□□ 0.7
STX1A-201ENST00000222812 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
STX1A-201ENST00000222812 DDX54Q8TDD1 881 aaKnown RBP19.41■□□□□ 0.7
STX1A-201ENST00000222812 USP21Q9UK80 565 aa19.41■□□□□ 0.7
STX1A-201ENST00000222812 BCAR3O75815 825 aa19.4■□□□□ 0.7
STX1A-201ENST00000222812 C8orf58Q8NAV2 365 aa19.4■□□□□ 0.7
STX1A-201ENST00000222812 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.4■□□□□ 0.7
STX1A-201ENST00000222812 RNF123Q5XPI4 1314 aa19.4■□□□□ 0.7
STX1A-201ENST00000222812 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
STX1A-201ENST00000222812 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
STX1A-201ENST00000222812 PCDH11XQ9BZA7 1347 aa19.39■□□□□ 0.7
STX1A-201ENST00000222812 PCDH11YQ9BZA8 1340 aa19.39■□□□□ 0.7
STX1A-201ENST00000222812 PLIN1O60240 522 aa19.39■□□□□ 0.69
STX1A-201ENST00000222812 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.69
STX1A-201ENST00000222812 KAT6BQ8WYB5 2073 aa19.38■□□□□ 0.69
STX1A-201ENST00000222812 TEFQ10587 303 aa19.38■□□□□ 0.69
STX1A-201ENST00000222812 BCL2L13Q9BXK5 485 aa19.38■□□□□ 0.69
STX1A-201ENST00000222812 AFF2P51816 1311 aa19.38■□□□□ 0.69
STX1A-201ENST00000222812 RARSP54136 660 aaKnown RBP19.37■□□□□ 0.69
STX1A-201ENST00000222812 RRP1P56182 461 aaKnown RBP19.37■□□□□ 0.69
STX1A-201ENST00000222812 VPS72Q15906 364 aa19.37■□□□□ 0.69
STX1A-201ENST00000222812 KCNQ3O43525 872 aa19.36■□□□□ 0.69
STX1A-201ENST00000222812 THRAP3Q9Y2W1 955 aaKnown RBP19.36■□□□□ 0.69
STX1A-201ENST00000222812 TOGARAM1Q9Y4F4 1720 aa19.36■□□□□ 0.69
STX1A-201ENST00000222812 VAMP4O75379 141 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms