RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 USP31Q70CQ4 1352 aa19.85■□□□□ 0.77
SF3A2-201ENST00000221494 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
SF3A2-201ENST00000221494 ITPRIPQ8IWB1 547 aa19.84■□□□□ 0.77
SF3A2-201ENST00000221494 ORAI2Q96SN7 254 aa19.84■□□□□ 0.77
SF3A2-201ENST00000221494 PANK2Q9BZ23 570 aa19.84■□□□□ 0.77
SF3A2-201ENST00000221494 STRCP1A6NGW2 1772 aa19.84■□□□□ 0.77
SF3A2-201ENST00000221494 ESPNB1AK53 854 aa19.84■□□□□ 0.77
SF3A2-201ENST00000221494 EXOSC9Q06265 439 aaKnown RBP19.84■□□□□ 0.77
SF3A2-201ENST00000221494 SSH1Q8WYL5 1049 aa19.84■□□□□ 0.77
SF3A2-201ENST00000221494 DIAPH1O60610 1272 aaKnown RBP19.83■□□□□ 0.77
SF3A2-201ENST00000221494 RRS1Q15050 365 aaKnown RBP19.83■□□□□ 0.77
SF3A2-201ENST00000221494 NAP1L5Q96NT1 182 aaPredicted RBP19.83■□□□□ 0.76
SF3A2-201ENST00000221494 HSP90AA1P07900 732 aaKnown RBP19.82■□□□□ 0.76
SF3A2-201ENST00000221494 GCC1Q96CN9 775 aa19.82■□□□□ 0.76
SF3A2-201ENST00000221494 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
SF3A2-201ENST00000221494 TRIM35Q9UPQ4 493 aa19.82■□□□□ 0.76
SF3A2-201ENST00000221494 C1orf167Q5SNV9 1468 aa19.81■□□□□ 0.76
SF3A2-201ENST00000221494 DCCP43146 1447 aa19.8■□□□□ 0.76
SF3A2-201ENST00000221494 U2SURPO15042 1029 aaKnown RBP19.8■□□□□ 0.76
SF3A2-201ENST00000221494 ATF3P18847 181 aa19.8■□□□□ 0.76
SF3A2-201ENST00000221494 CHD1LQ86WJ1 897 aa19.8■□□□□ 0.76
SF3A2-201ENST00000221494 TNPO1Q92973 898 aaKnown RBP19.8■□□□□ 0.76
SF3A2-201ENST00000221494 CDK12Q9NYV4 1490 aaPredicted RBP19.79■□□□□ 0.76
SF3A2-201ENST00000221494 HSP90AB1P08238 724 aaKnown RBP19.79■□□□□ 0.76
SF3A2-201ENST00000221494 NLRP6P59044 892 aa19.79■□□□□ 0.76
SF3A2-201ENST00000221494 PSME1Q06323 249 aa19.79■□□□□ 0.76
SF3A2-201ENST00000221494 TRIM44Q96DX7 344 aaPredicted RBP19.79■□□□□ 0.76
SF3A2-201ENST00000221494 NOB1Q9ULX3 412 aaKnown RBP19.79■□□□□ 0.76
SF3A2-201ENST00000221494 ZNF335Q9H4Z2 1342 aaPredicted RBP19.79■□□□□ 0.76
SF3A2-201ENST00000221494 FOXO3O43524 673 aa19.79■□□□□ 0.76
SF3A2-201ENST00000221494 TPM2P07951 284 aa19.79■□□□□ 0.76
SF3A2-201ENST00000221494 TMEM57Q8N5G2 664 aa19.79■□□□□ 0.76
SF3A2-201ENST00000221494 SPRYD3Q8NCJ5 442 aa19.79■□□□□ 0.76
SF3A2-201ENST00000221494 ARHGAP45Q92619 1136 aa19.79■□□□□ 0.76
SF3A2-201ENST00000221494 ABTB2Q8N961 1025 aa19.78■□□□□ 0.76
SF3A2-201ENST00000221494 TSR2Q969E8 191 aaKnown RBP19.78■□□□□ 0.76
SF3A2-201ENST00000221494 IL13P35225 146 aa19.77■□□□□ 0.76
SF3A2-201ENST00000221494 MST1RQ04912 1400 aa19.77■□□□□ 0.76
SF3A2-201ENST00000221494 GOLGA6L22H0YM25 854 aa19.77■□□□□ 0.75
SF3A2-201ENST00000221494 CCDC173Q0VFZ6 552 aa19.77■□□□□ 0.75
SF3A2-201ENST00000221494 CADPS2Q86UW7 1296 aa19.77■□□□□ 0.75
SF3A2-201ENST00000221494 PIK3C2AO00443 1686 aa19.76■□□□□ 0.75
SF3A2-201ENST00000221494 PPP1R9BQ96SB3 815 aa19.76■□□□□ 0.75
SF3A2-201ENST00000221494 K7ELQ4 463 aaPredicted RBP19.75■□□□□ 0.75
SF3A2-201ENST00000221494 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
SF3A2-201ENST00000221494 LRRC7Q96NW7 1537 aa19.75■□□□□ 0.75
SF3A2-201ENST00000221494 MSH6P52701 1360 aa19.75■□□□□ 0.75
SF3A2-201ENST00000221494 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
SF3A2-201ENST00000221494 SOX12O15370 315 aa19.74■□□□□ 0.75
SF3A2-201ENST00000221494 HSP90AA2PQ14568 343 aaPredicted RBP19.74■□□□□ 0.75
SF3A2-201ENST00000221494 MAP2P11137 1827 aaKnown RBP19.74■□□□□ 0.75
SF3A2-201ENST00000221494 MAP3K19Q56UN5 1328 aa19.74■□□□□ 0.75
SF3A2-201ENST00000221494 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
SF3A2-201ENST00000221494 FCHSD2O94868 740 aa19.73■□□□□ 0.75
SF3A2-201ENST00000221494 FGD1P98174 961 aa19.73■□□□□ 0.75
SF3A2-201ENST00000221494 KIF2CQ99661 725 aa19.73■□□□□ 0.75
SF3A2-201ENST00000221494 TERF1P54274 439 aa19.72■□□□□ 0.75
SF3A2-201ENST00000221494 XPCQ01831 940 aaPredicted RBP19.72■□□□□ 0.75
SF3A2-201ENST00000221494 KLHL40Q2TBA0 621 aa19.72■□□□□ 0.75
SF3A2-201ENST00000221494 HS1BP3Q53T59 392 aa19.71■□□□□ 0.75
SF3A2-201ENST00000221494 HSP90AB2PQ58FF8 381 aa19.71■□□□□ 0.75
SF3A2-201ENST00000221494 KRT28Q7Z3Y7 464 aa19.71■□□□□ 0.75
SF3A2-201ENST00000221494 RIPK4P57078 832 aa19.7■□□□□ 0.74
SF3A2-201ENST00000221494 ANP32BQ92688 251 aaKnown RBP19.7■□□□□ 0.74
SF3A2-201ENST00000221494 EIF4A2Q14240 407 aaKnown RBP19.7■□□□□ 0.74
SF3A2-201ENST00000221494 LNPKQ9C0E8 428 aa19.7■□□□□ 0.74
SF3A2-201ENST00000221494 SBNO1A3KN83 1393 aa19.69■□□□□ 0.74
SF3A2-201ENST00000221494 USP54Q70EL1 1684 aa19.69■□□□□ 0.74
SF3A2-201ENST00000221494 ERBB4Q15303 1308 aa19.68■□□□□ 0.74
SF3A2-201ENST00000221494 ZBTB7BO15156 539 aaPredicted RBP19.68■□□□□ 0.74
SF3A2-201ENST00000221494 CDC45O75419 566 aa19.68■□□□□ 0.74
SF3A2-201ENST00000221494 FLT4P35916 1363 aa19.67■□□□□ 0.74
SF3A2-201ENST00000221494 HMOX1P09601 288 aa19.67■□□□□ 0.74
SF3A2-201ENST00000221494 GAS2L3Q86XJ1 694 aa19.67■□□□□ 0.74
SF3A2-201ENST00000221494 PEAK1Q9H792 1746 aa19.67■□□□□ 0.74
SF3A2-201ENST00000221494 KIF1AQ12756 1690 aa19.67■□□□□ 0.74
SF3A2-201ENST00000221494 PRKAR2BP31323 418 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 ZNF445P59923 1031 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 NUCB2P80303 420 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 RABEP1Q15276 862 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 TBC1D9Q6ZT07 1266 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 MARF1Q9Y4F3 1742 aaKnown RBP19.66■□□□□ 0.74
SF3A2-201ENST00000221494 ABCC4O15439 1325 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 XIRP1Q702N8 1843 aaKnown RBP19.66■□□□□ 0.74
SF3A2-201ENST00000221494 AMPHP49418 695 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 ZSCAN30Q86W11 494 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 HOMEZQ8IX15 550 aa19.66■□□□□ 0.74
SF3A2-201ENST00000221494 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
SF3A2-201ENST00000221494 NASPP49321 788 aaPredicted RBP19.64■□□□□ 0.73
SF3A2-201ENST00000221494 KCNH5Q8NCM2 988 aa19.64■□□□□ 0.73
SF3A2-201ENST00000221494 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.73
SF3A2-201ENST00000221494 HOXC9P31274 260 aa19.63■□□□□ 0.73
SF3A2-201ENST00000221494 ANKRD45Q5TZF3 282 aa19.63■□□□□ 0.73
SF3A2-201ENST00000221494 BRINP3Q76B58 766 aa19.63■□□□□ 0.73
SF3A2-201ENST00000221494 MRPL50Q8N5N7 158 aaKnown RBP19.63■□□□□ 0.73
SF3A2-201ENST00000221494 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
SF3A2-201ENST00000221494 SLAIN2Q9P270 581 aa19.63■□□□□ 0.73
SF3A2-201ENST00000221494 NPHP3Q7Z494 1330 aa19.63■□□□□ 0.73
SF3A2-201ENST00000221494 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.63■□□□□ 0.73
SF3A2-201ENST00000221494 BAG4O95429 457 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms