RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.32
KNOP1-201ENST00000219837 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
KNOP1-201ENST00000219837 MRE11P49959 708 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 STARD3NLO95772 234 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
KNOP1-201ENST00000219837 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 IDH1O75874 414 aaKnown RBP13.07□□□□□ -0.32
KNOP1-201ENST00000219837 AIDAQ96BJ3 306 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
KNOP1-201ENST00000219837 TNIP1Q15025 636 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 FAM177A1Q8N128 213 aaPredicted RBP13.07□□□□□ -0.32
KNOP1-201ENST00000219837 CRACR2BQ8N4Y2 399 aaPredicted RBP13.07□□□□□ -0.32
KNOP1-201ENST00000219837 SLC12A5Q9H2X9 1139 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 BMP2KQ9NSY1 1161 aaPredicted RBP13.07□□□□□ -0.32
KNOP1-201ENST00000219837 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
KNOP1-201ENST00000219837 MBD3O95983 291 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
KNOP1-201ENST00000219837 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
KNOP1-201ENST00000219837 FAM193AP78312 1265 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 METTL24Q5JXM2 366 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 CFTRP13569 1480 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 SLC26A8Q96RN1 970 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 SRGAP3O43295 1099 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
KNOP1-201ENST00000219837 CENPHQ9H3R5 247 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 CCDC192P0DO97 292 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 IMMTQ16891 758 aaKnown RBP13.06□□□□□ -0.32
KNOP1-201ENST00000219837 NUTM1Q86Y26 1132 aa13.06□□□□□ -0.32
KNOP1-201ENST00000219837 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 DHX37Q8IY37 1157 aaKnown RBP13.05□□□□□ -0.32
KNOP1-201ENST00000219837 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
KNOP1-201ENST00000219837 WASF1Q92558 559 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 TSPYL1Q9H0U9 437 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 LEKR1Q6ZMV7 388 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 MIS18AQ9NYP9 233 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
KNOP1-201ENST00000219837 CTNNA3Q9UI47 895 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 CAVIN4Q5BKX8 364 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 SPATA32Q96LK8 384 aa13.05□□□□□ -0.32
KNOP1-201ENST00000219837 TAX1BP1Q86VP1 789 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 CHD1LQ86WJ1 897 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 MYD88Q99836 296 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 CEP131Q9UPN4 1083 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 K7ELQ4 463 aaPredicted RBP13.04□□□□□ -0.32
KNOP1-201ENST00000219837 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
KNOP1-201ENST00000219837 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
KNOP1-201ENST00000219837 BLOC1S2Q6QNY1 142 aa13.03□□□□□ -0.32
KNOP1-201ENST00000219837 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
KNOP1-201ENST00000219837 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
KNOP1-201ENST00000219837 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
KNOP1-201ENST00000219837 KIAA1328Q86T90 577 aa13.03□□□□□ -0.32
KNOP1-201ENST00000219837 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
KNOP1-201ENST00000219837 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.32
KNOP1-201ENST00000219837 MINDY4BA8MYZ0 360 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 KRT85P78386 507 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 DZIP1Q86YF9 867 aaKnown RBP13.02□□□□□ -0.33
KNOP1-201ENST00000219837 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 WDR63Q8IWG1 891 aa13.02□□□□□ -0.33
KNOP1-201ENST00000219837 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
KNOP1-201ENST00000219837 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
KNOP1-201ENST00000219837 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
KNOP1-201ENST00000219837 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
KNOP1-201ENST00000219837 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
KNOP1-201ENST00000219837 EPRSP07814 1512 aaKnown RBP13□□□□□ -0.33
KNOP1-201ENST00000219837 HFM1A2PYH4 1435 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 ZNF397Q8NF99 534 aaPredicted RBP13□□□□□ -0.33
KNOP1-201ENST00000219837 CUL5Q93034 780 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 DDX11Q96FC9 970 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 IFT140Q96RY7 1462 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 EIF5P55010 431 aaKnown RBP13□□□□□ -0.33
KNOP1-201ENST00000219837 IQCEQ6IPM2 695 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 FAM135AQ9P2D6 1515 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 RAPGEF3O95398 923 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 MPNDQ8N594 471 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 TSG101Q99816 390 aa13□□□□□ -0.33
KNOP1-201ENST00000219837 LIG1P18858 919 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
KNOP1-201ENST00000219837 UBA5Q9GZZ9 404 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
KNOP1-201ENST00000219837 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 AKNAQ7Z591 1439 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
KNOP1-201ENST00000219837 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms