RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 PLEKHF1Q96S99 279 aa10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 UPF3BQ9BZI7 483 aaKnown RBP10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 LGR6Q9HBX8 967 aa10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 KDM5AP29375 1690 aaKnown RBP10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 TET3O43151 1660 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 CHPF2Q9P2E5 772 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 CEP152O94986 1710 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 RNF17Q9BXT8 1623 aaKnown RBP10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 CABP4P57796 275 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 DDX49Q9Y6V7 483 aaKnown RBP10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 SBNO2Q9Y2G9 1366 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 REC8O95072 547 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 PTMAP06454 111 aaKnown RBP10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 HOXC9P31274 260 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 CCT4P50991 539 aaKnown RBP10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 PIP4K2BP78356 416 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 LRRCC1Q9C099 1032 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 AAMPQ13685 434 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 CHMP5Q9NZZ3 219 aa10.53□□□□□ -0.72
CSNK2A1-201ENST00000217244 KIF1BO60333 1816 aa10.52□□□□□ -0.72
CSNK2A1-201ENST00000217244 ATP5J2-PTCD1G3V325 749 aa10.52□□□□□ -0.72
CSNK2A1-201ENST00000217244 GPATCH3Q96I76 525 aa10.52□□□□□ -0.72
CSNK2A1-201ENST00000217244 MYOM2P54296 1465 aa10.52□□□□□ -0.73
CSNK2A1-201ENST00000217244 GCP02774 474 aa10.52□□□□□ -0.73
CSNK2A1-201ENST00000217244 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
CSNK2A1-201ENST00000217244 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
CSNK2A1-201ENST00000217244 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
CSNK2A1-201ENST00000217244 SPHKAPQ2M3C7 1700 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 KCNQ3O43525 872 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 KDM4AO75164 1064 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 ADAMTS2O95450 1211 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 TRMT2AQ8IZ69 625 aaKnown RBP10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 CLASRPQ8N2M8 674 aaKnown RBP10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 MADDQ8WXG6 1647 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 NBPF6Q5VWK0 638 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 CWC27Q6UX04 472 aaKnown RBP10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 KCNH5Q8NCM2 988 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 NBPF4Q96M43 638 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 MCTP1Q6DN14 999 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 IL16Q14005 1332 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 GOLGA6L3A6NEY3 463 aa10.51□□□□□ -0.73
CSNK2A1-201ENST00000217244 PPRC1Q5VV67 1664 aaKnown RBP10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 ABCA9Q8IUA7 1624 aa10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 CCDC8Q9H0W5 538 aaPredicted RBP10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 ABCA6Q8N139 1617 aa10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 RPAP2Q8IXW5 612 aaPredicted RBP10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
CSNK2A1-201ENST00000217244 CWF19L2Q2TBE0 894 aaKnown RBP10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 TOMM22Q9NS69 142 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 FLT4P35916 1363 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 GOLGA6L4A6NEF3 574 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 NUCB1Q02818 461 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 PPP1R42Q7Z4L9 355 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 AACSQ86V21 672 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 MYD88Q99836 296 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 PA2G4Q9UQ80 394 aaKnown RBP10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 MAP3K2Q9Y2U5 619 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 SETD1BQ9UPS6 1966 aaKnown RBP10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 NFATC2IPQ8NCF5 419 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 FSD1Q9BTV5 496 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
CSNK2A1-201ENST00000217244 INSRP06213 1382 aa10.48□□□□□ -0.73
CSNK2A1-201ENST00000217244 SYNMO15061 1565 aa10.48□□□□□ -0.73
CSNK2A1-201ENST00000217244 DNAAF4Q8WXU2 420 aa10.48□□□□□ -0.73
CSNK2A1-201ENST00000217244 KIDINS220Q9ULH0 1771 aa10.48□□□□□ -0.73
CSNK2A1-201ENST00000217244 VPS37CA5D8V6 355 aaPredicted RBP10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 HDAC1Q13547 482 aaPredicted RBP10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 TBC1D32Q96NH3 1257 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 TTC21AQ8NDW8 1320 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 PPFIA3O75145 1194 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 NAP1L5Q96NT1 182 aaPredicted RBP10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 BOLA2Q9H3K6 86 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 SDSP20132 328 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 MX1P20591 662 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 IL17REQ8NFR9 667 aa10.47□□□□□ -0.73
CSNK2A1-201ENST00000217244 PLEKHG3A1L390 1219 aa10.46□□□□□ -0.73
CSNK2A1-201ENST00000217244 TRAK2O60296 914 aa10.46□□□□□ -0.73
CSNK2A1-201ENST00000217244 MPNDQ8N594 471 aa10.46□□□□□ -0.73
CSNK2A1-201ENST00000217244 A2ML1A8K2U0 1454 aa10.46□□□□□ -0.73
CSNK2A1-201ENST00000217244 MSH6P52701 1360 aa10.46□□□□□ -0.73
CSNK2A1-201ENST00000217244 CHL1O00533 1208 aa10.46□□□□□ -0.74
CSNK2A1-201ENST00000217244 ERC2O15083 957 aa10.46□□□□□ -0.74
CSNK2A1-201ENST00000217244 CEP85Q6P2H3 762 aa10.46□□□□□ -0.74
CSNK2A1-201ENST00000217244 SMC5Q8IY18 1101 aa10.46□□□□□ -0.74
CSNK2A1-201ENST00000217244 STK3Q13188 491 aa10.45□□□□□ -0.74
CSNK2A1-201ENST00000217244 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
CSNK2A1-201ENST00000217244 UBE3BQ7Z3V4 1068 aa10.45□□□□□ -0.74
CSNK2A1-201ENST00000217244 RNF214Q8ND24 703 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms