RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CLTCQ00610 1675 aaKnown RBP10.25□□□□□ -0.77
CDC27-201ENST00000066544 CHL1O00533 1208 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 TTC22Q5TAA0 569 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 ANKRD44Q8N8A2 993 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 MAP3K19Q56UN5 1328 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 FAM43AQ8N2R8 423 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 CHAMP1Q96JM3 812 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 KIF20BQ96Q89 1820 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 CDK12Q9NYV4 1490 aaPredicted RBP10.24□□□□□ -0.77
CDC27-201ENST00000066544 GAS2L3Q86XJ1 694 aa10.24□□□□□ -0.77
CDC27-201ENST00000066544 INTS3Q68E01 1043 aaKnown RBP10.24□□□□□ -0.77
CDC27-201ENST00000066544 AATKQ6ZMQ8 1374 aa10.24□□□□□ -0.77
CDC27-201ENST00000066544 NLRP6P59044 892 aa10.24□□□□□ -0.77
CDC27-201ENST00000066544 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
CDC27-201ENST00000066544 PIK3R4Q99570 1358 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 PKP1Q13835 747 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 USHBP1Q8N6Y0 703 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 GRPEL1Q9HAV7 217 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 ANKRD26Q9UPS8 1709 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 RAB3GAP1Q15042 981 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 DDX49Q9Y6V7 483 aaKnown RBP10.23□□□□□ -0.77
CDC27-201ENST00000066544 TNRQ92752 1358 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 FSD2A1L4K1 749 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 AMOTL2Q9Y2J4 779 aa10.23□□□□□ -0.77
CDC27-201ENST00000066544 RPAP2Q8IXW5 612 aaPredicted RBP10.22□□□□□ -0.77
CDC27-201ENST00000066544 FOXD4L6Q3SYB3 417 aaPredicted RBP10.22□□□□□ -0.77
CDC27-201ENST00000066544 FOXD4L3Q6VB84 417 aaPredicted RBP10.22□□□□□ -0.77
CDC27-201ENST00000066544 STK31Q9BXU1 1019 aa10.22□□□□□ -0.77
CDC27-201ENST00000066544 MCTP1Q6DN14 999 aa10.22□□□□□ -0.77
CDC27-201ENST00000066544 EYA1Q99502 592 aa10.22□□□□□ -0.77
CDC27-201ENST00000066544 PPP6R1Q9UPN7 881 aa10.22□□□□□ -0.77
CDC27-201ENST00000066544 ZGPATQ8N5A5 531 aaKnown RBP10.22□□□□□ -0.77
CDC27-201ENST00000066544 RILPL2Q969X0 211 aa10.22□□□□□ -0.77
CDC27-201ENST00000066544 RTL1A6NKG5 1358 aa10.22□□□□□ -0.77
CDC27-201ENST00000066544 DDIT3P35638 169 aa10.22□□□□□ -0.77
CDC27-201ENST00000066544 TRIM6-TRIM34B2RNG4 842 aa10.21□□□□□ -0.77
CDC27-201ENST00000066544 MRE11P49959 708 aa10.21□□□□□ -0.77
CDC27-201ENST00000066544 HAP1P54257 671 aaPredicted RBP10.21□□□□□ -0.77
CDC27-201ENST00000066544 USP26Q9BXU7 913 aa10.21□□□□□ -0.77
CDC27-201ENST00000066544 CASC1Q6TDU7 716 aa10.21□□□□□ -0.78
CDC27-201ENST00000066544 GOLGA6L22H0YM25 854 aa10.21□□□□□ -0.78
CDC27-201ENST00000066544 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.78
CDC27-201ENST00000066544 EIF2S2P20042 333 aaKnown RBP10.2□□□□□ -0.78
CDC27-201ENST00000066544 RABEP1Q15276 862 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 NAP1L5Q96NT1 182 aaPredicted RBP10.2□□□□□ -0.78
CDC27-201ENST00000066544 IL1RAPL2Q9NP60 686 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 TMEM2Q9UHN6 1383 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 HMMRO75330 724 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 CDC42BPGQ6DT37 1551 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 BAG4O95429 457 aaKnown RBP10.2□□□□□ -0.78
CDC27-201ENST00000066544 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 DLC1Q96QB1 1528 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 ATP10DQ9P241 1426 aa10.2□□□□□ -0.78
CDC27-201ENST00000066544 AK9Q5TCS8 1911 aa10.19□□□□□ -0.78
CDC27-201ENST00000066544 DLG5Q8TDM6 1919 aa10.19□□□□□ -0.78
CDC27-201ENST00000066544 PNMA6EA0A0J9YXQ4 647 aa10.19□□□□□ -0.78
CDC27-201ENST00000066544 MAP4K4O95819 1239 aaPredicted RBP10.19□□□□□ -0.78
CDC27-201ENST00000066544 NEK4P51957 841 aa10.19□□□□□ -0.78
CDC27-201ENST00000066544 TRIM44Q96DX7 344 aaPredicted RBP10.19□□□□□ -0.78
CDC27-201ENST00000066544 PLEKHG3A1L390 1219 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 ANXA1P04083 346 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 PDE1AP54750 535 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 FLIIQ13045 1269 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 CAVIN1Q6NZI2 390 aaKnown RBP10.18□□□□□ -0.78
CDC27-201ENST00000066544 ANO2Q9NQ90 1003 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 NCOA3Q9Y6Q9 1424 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 GNAI2P04899 355 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 RGS12O14924 1447 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 PTPRCP08575 1304 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 DTNBO60941 627 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 LRRFIP2Q9Y608 721 aaKnown RBP10.18□□□□□ -0.78
CDC27-201ENST00000066544 ABTB2Q8N961 1025 aa10.18□□□□□ -0.78
CDC27-201ENST00000066544 UPF3BQ9BZI7 483 aaKnown RBP10.18□□□□□ -0.78
CDC27-201ENST00000066544 ST18O60284 1047 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 USP6P35125 1406 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 PRPF40AO75400 957 aaKnown RBP10.17□□□□□ -0.78
CDC27-201ENST00000066544 REC8O95072 547 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 RIMBP3CA6NJZ7 1639 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 RIMBP3BA6NNM3 1639 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 RIMBP3Q9UFD9 1639 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 ERC2O15083 957 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 LMOD2Q6P5Q4 547 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
CDC27-201ENST00000066544 CCT4P50991 539 aaKnown RBP10.16□□□□□ -0.78
CDC27-201ENST00000066544 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
CDC27-201ENST00000066544 RBM27Q9P2N5 1060 aaKnown RBP10.16□□□□□ -0.78
CDC27-201ENST00000066544 DIP2BQ9P265 1576 aa10.16□□□□□ -0.78
CDC27-201ENST00000066544 KNDC1Q76NI1 1749 aa10.16□□□□□ -0.78
CDC27-201ENST00000066544 ADAMTS13Q76LX8 1427 aa10.16□□□□□ -0.78
CDC27-201ENST00000066544 NRXN3Q9Y4C0 1643 aa10.16□□□□□ -0.78
CDC27-201ENST00000066544 SKOR2Q2VWA4 1001 aaPredicted RBP10.15□□□□□ -0.78
CDC27-201ENST00000066544 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 IL17REQ8NFR9 667 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
CDC27-201ENST00000066544 PALD1Q9ULE6 856 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 CRB1P82279 1406 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 UNC5CLQ8IV45 518 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 SIRT1Q96EB6 747 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms