RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SUN2Q9UH99 717 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 TRMT6Q9UJA5 497 aaKnown RBP8.79□□□□□ -1
PHGDH-219ENST00000641513 TRIM33Q9UPN9 1127 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 FAM50BQ9Y247 325 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 STK38LQ9Y2H1 464 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PPIL1Q9Y3C6 166 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 COL4A2P08572 1712 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 TRPM6Q9BX84 2022 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 TMEM265A0A087WTH1 108 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 C1QTNF3-AMACRE9PGA6 284 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 TK2O00142 265 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 NEMP1O14524 444 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 SLC22A2O15244 555 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 GYG2O15488 501 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 GSC2O15499 205 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 NIPSNAP2O75323 286 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ESRRAP11474 423 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 FGF3P11487 239 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 ZNF30P17039 623 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ZNF7P17097 686 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 ITGB6P18564 788 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 KCNA5P22460 613 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 TIE1P35590 1138 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 EIF2DP41214 584 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 IL12RB1P42701 662 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 SPINT3P49223 89 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 CSRP3P50461 194 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 GALK1P51570 392 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 PTPN5P54829 565 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 PFKPQ01813 784 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 PTSQ03393 145 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 DLG1Q12959 904 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 NFATC2Q13469 925 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ITGA9Q13797 1035 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ELAVL3Q14576 367 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 ACOX1Q15067 660 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 E2F5Q15329 346 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ZRSR2Q15696 482 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 TRMT5Q32P41 509 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 C9orf64Q5T6V5 341 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 METTL21CQ5VZV1 264 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ZDHHC20Q5W0Z9 365 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 CERS6Q6ZMG9 384 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 RFLNAQ6ZTI6 216 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 PARS2Q7L3T8 475 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 CACUL1Q86Y37 369 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 MMAAQ8IVH4 418 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 SPNS2Q8IVW8 549 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 CHPFQ8IZ52 775 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 CENPLQ8N0S6 344 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 CBARPQ8N350 705 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 FSTL5Q8N475 847 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 KDM1BQ8NB78 822 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 GPR26Q8NDV2 337 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 TMIEQ8NEW7 156 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 PIWIL2Q8TC59 973 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 PPP4R1Q8TF05 950 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 VOPP1Q96AW1 172 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ARRDC3Q96B67 414 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 PPP1R16AQ96I34 528 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 LYSMD1Q96S90 227 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ACOX2Q99424 681 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 GPR21Q99679 349 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 MIPEPQ99797 713 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 P2RY13Q9BPV8 354 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 WRAP53Q9BUR4 548 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 SPATA16Q9BXB7 569 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 CADM1Q9BY67 442 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 MRPL46Q9H2W6 279 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 DENND2DQ9H6A0 471 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 SYTL2Q9HCH5 934 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 IL26Q9NPH9 171 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 IGSF5Q9NSI5 407 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 MRGBPQ9NV56 204 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 ARL8BQ9NVJ2 186 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 THAP10Q9P2Z0 257 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 XPR1Q9UBH6 696 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 DKK3Q9UBP4 350 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 TAGLN3Q9UI15 199 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 TSR3Q9UJK0 312 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 DCTN4Q9UJW0 460 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 SARDHQ9UL12 918 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 COLQQ9Y215 455 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 APOBEC2Q9Y235 224 aaKnown RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.78□□□□□ -1
PHGDH-219ENST00000641513 COMMD10Q9Y6G5 202 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 STON1Q9Y6Q2 735 aa8.78□□□□□ -1
PHGDH-219ENST00000641513 TSPAN11A1L157 253 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ANTXRLA6NF34 631 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 G3V2L1 256 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 PLK4O00444 970 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 PRMT5O14744 637 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 HGSO14964 777 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 SYNCRIPO60506 623 aaKnown RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 TRIM13O60858 407 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 HSPA4LO95757 839 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ESR1P03372 595 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 RBP1P09455 135 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms