RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 ARHGAP8P85298 464 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 PDGFRLQ15198 375 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 TSNQ15631 228 aaKnown RBP17.12■□□□□ 0.33
PHGDH-208ENST00000641023 CUZD1Q86UP6 607 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 TREML1Q86YW5 311 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 GIMAP7Q8NHV1 300 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 HCAR2Q8TDS4 363 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 LINGO1Q96FE5 620 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 BOCQ9BWV1 1114 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 ZFP14Q9HCL3 533 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.12■□□□□ 0.339e-8■■■□□ 19.1
PHGDH-208ENST00000641023 PKD2L2Q9NZM6 624 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 SUPT3HB4E1H0 165 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 SUPT3HO75486 399 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 NSG1P42857 185 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 ZNF805Q5CZA5 627 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 TMEM184AQ6ZMB5 413 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 CPNE9Q8IYJ1 553 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 FBXO39Q8N4B4 442 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 FUBP1Q96AE4 644 aaKnown RBP17.12■□□□□ 0.33
PHGDH-208ENST00000641023 PDLIM5Q96HC4 596 aaKnown RBP17.12■□□□□ 0.33
PHGDH-208ENST00000641023 GSTO2Q9H4Y5 243 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 CDYLQ9Y232 598 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 TSPAN11A1L157 253 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 CDC7O00311 574 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 GYG2O15488 501 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 XPAP23025 273 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-208ENST00000641023 EPHA3P29320 983 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 SPINT3P49223 89 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 EIF4HQ15056 248 aaKnown RBP17.11■□□□□ 0.33
PHGDH-208ENST00000641023 TTC31Q49AM3 519 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-208ENST00000641023 LRRC73Q5JTD7 316 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 CLDN19Q8N6F1 224 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 CEP290O15078 2479 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 OTOL1A6NHN0 477 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-208ENST00000641023 E9PBE3 544 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 MGRN1O60291 552 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 KLHL41O60662 606 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 ECI2O75521 394 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 C1SP09871 688 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 VIPR1P32241 457 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 CA5AP35218 305 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 SLC6A11P48066 632 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 NAA20P61599 178 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 KDSRQ06136 332 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-208ENST00000641023 UNC50Q53HI1 259 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 MACC1Q6ZN28 852 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 ULK4Q96C45 1275 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 OR52B2Q96RD2 323 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 COPS8Q99627 209 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 CCDC28BQ9BUN5 200 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 WDR55Q9H6Y2 383 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-208ENST00000641023 ZDHHC3Q9NYG2 299 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 DKK3Q9UBP4 350 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 CDH7Q9ULB5 785 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 TMCO1Q9UM00 188 aa17.11■□□□□ 0.33
PHGDH-208ENST00000641023 C2orf16Q68DN1 1984 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 GOLGA8QA0A0J9YX86 632 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 GOLGA8OA6NCC3 632 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 NPEPPSL1A6NEC2 478 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 UPK3BL1B0FP48 263 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 PRRT4C9JH25 899 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 UPK3BL2E5RIL1 263 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 SPECC1L-ADORA2AF8WAN1 911 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 GOLGA8NF8WBI6 632 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 RFXAPO00287 272 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 NEMP1O14524 444 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 SLC25A14O95258 325 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-208ENST00000641023 CTSLP07711 333 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 RGS4P49798 205 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 MNAT1P51948 309 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 LSM12Q3MHD2 195 aaKnown RBP17.1■□□□□ 0.33
PHGDH-208ENST00000641023 ATP13A5Q4VNC0 1218 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 TANGO2Q6ICL3 276 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 TXNDC11Q6PKC3 985 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 RPS27LQ71UM5 84 aaKnown RBP17.1■□□□□ 0.33
PHGDH-208ENST00000641023 PPP1R36Q96LQ0 422 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 MTG2Q9H4K7 406 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 TAS2R1Q9NYW7 299 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 IKZF3Q9UKT9 509 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 ATG2AQ2TAZ0 1938 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 SCN8AQ9UQD0 1980 aa17.1■□□□□ 0.33
PHGDH-208ENST00000641023 TMEM233B4DJY2 109 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 STX16-NPEPL1H3BU86 382 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 STX16O14662 325 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 SIX3O95343 332 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 TRIM16O95361 564 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 TIMP2P16035 220 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 DGKAP23743 735 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 FCARP24071 287 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 ANKRD54Q6NXT1 300 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 LONP2Q86WA8 852 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 GPSM1Q86YR5 675 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 TMPRSS6Q8IU80 811 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 TEX9Q8N6V9 391 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 ZNF366Q8N895 744 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 CMTM5Q96DZ9 223 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 PCDH12Q9NPG4 1184 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms