RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CLIP3Q96DZ5 547 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 SIGLEC10Q96LC7 697 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 ABCB8Q9NUT2 735 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 PSAT1Q9Y617 370 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 SNAP91O60641 907 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 AOC2O75106 756 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 FGBP02675 491 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 CDH5P33151 784 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 EPS8Q12929 822 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 PLEKHG4Q58EX7 1191 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 ANKRD46Q86W74 232 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 RGL4Q8IZJ4 473 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 KREMEN2Q8NCW0 462 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 PHF10Q8WUB8 498 aaKnown RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 TIFAQ96CG3 184 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 ARMC7Q9H6L4 198 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 POLR3BQ9NW08 1133 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 SRRDQ9UH36 339 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 PIRO00625 290 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 TRBC1P01850 177 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 ESR1P03372 595 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 GSTA3Q16772 222 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 GET4Q7L5D6 327 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 PAGE2Q7Z2X7 111 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 VMP1Q96GC9 406 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 KLHL32Q96NJ5 620 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 OSBPL11Q9BXB4 747 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 HAPLN2Q9GZV7 340 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 BBIP1A8MTZ0 92 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 BMP10O95393 424 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 NUDT14O95848 222 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 UQCRBP14927 111 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 EDNRBP24530 442 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 NR1H2P55055 460 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 PRKD1Q15139 912 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 ACSBG2Q5FVE4 666 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 ADGRF1Q5T601 910 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 C15orf39Q6ZRI6 1047 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 SPATA19Q7Z5L4 167 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CYP4Z2PQ8N1L4 340 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 VPS35Q96QK1 796 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 RAB23Q9ULC3 237 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 POMPQ9Y244 141 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 MGRN1O60291 552 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 POP4O95707 220 aaKnown RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 VAV1P15498 845 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CAPN13Q6MZZ7 669 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 MSANTD2Q6P1R3 559 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CFAP206Q8IYR0 622 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 DPP10Q8N608 796 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CDKN2AIPNLQ96HQ2 116 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 FERD3LQ96RJ6 166 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 TCF25Q9BQ70 676 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 OSBPL6Q9BZF3 934 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 ARHGEF3Q9NR81 526 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 ENOPH1Q9UHY7 261 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 MSRAQ9UJ68 235 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 TRBV23OR9-2A0A075B6M9 112 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 PRR23D1E9PI22 279 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 BEST1O76090 585 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CNTN5O94779 1100 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 PRR23D2P0DMB1 279 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 EFNA1P20827 205 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 PEX2P28328 305 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 PTGER3P43115 390 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 ZNF132P52740 706 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 EPHX4Q8IUS5 362 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 OR10G6Q8NH81 332 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 PPCDCQ96CD2 204 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CEP44Q9C0F1 390 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 EPB41L4BQ9H329 900 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 PAIP2BQ9ULR5 123 aaKnown RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 GNEQ9Y223 722 aaKnown RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 LYVE1Q9Y5Y7 322 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 ARVCFO00192 962 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 ATG13O75143 517 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CLDN9O95484 217 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 AMD1P17707 334 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 FEN1P39748 380 aaKnown RBP14.24□□□□□ -0.13
SCARB2-208ENST00000638372 LIPEQ05469 1076 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 RAB6CQ53S08 254 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 CPTPQ5TA50 214 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 C17orf64Q86WR6 236 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 FAIM2Q9BWQ8 316 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 RAB6CQ9H0N0 254 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 SLC45A1Q9Y2W3 748 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 Q9Y3F1 56 aa14.24□□□□□ -0.13
SCARB2-208ENST00000638372 TMEM233B4DJY2 109 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 UMPSP11172 480 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 MYL12AP19105 171 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 CSKP41240 450 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 RXRGP48443 463 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 CHIT1Q13231 466 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 MPP2Q14168 576 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 KCTD21Q4G0X4 260 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 COLGALT2Q8IYK4 626 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 PLD4Q96BZ4 506 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 FEM1CQ96JP0 617 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 GEMIN8Q9NWZ8 242 aaKnown RBP14.23□□□□□ -0.13
SCARB2-208ENST00000638372 KCTD3Q9Y597 815 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms