RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CCL4P13236 92 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 SLC5A2P31639 672 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 CLN3Q13286 438 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 XRCC4Q13426 336 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 NFATC2Q13469 925 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 TGIF1Q15583 401 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 FAM151BQ6UXP7 276 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 GLT6D1Q7Z4J2 308 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 ZNF547Q8IVP9 402 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 CCDC110Q8TBZ0 833 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 NAT14Q8WUY8 206 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 PMEPA1Q969W9 287 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 CCDC74BQ96LY2 380 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 VAT1Q99536 393 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 OSGEPL1Q9H4B0 414 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 TRIM39Q9HCM9 518 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 IL26Q9NPH9 171 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 KLC4Q9NSK0 619 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 WDR70Q9NW82 654 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 FOXJ2Q9P0K8 574 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 SCHIP1Q9P0W5 487 aaPredicted RBP17.51■□□□□ 0.39
PNKP-230ENST00000638016 DNAJC16Q9Y2G8 782 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 PRAMEF33A0A0G2JMD5 474 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 IGHV5-10-1A0A0J9YXX1 117 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 TCRBV7S2A1N4TA0A589 114 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 GAPDHSO14556 408 aaPredicted RBP17.5■□□□□ 0.39
PNKP-230ENST00000638016 KCNN4O15554 427 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A9O60656 530 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 PRAMEF10O60809 474 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 JMJD7P0C870 316 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A6P19224 532 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A1P22309 533 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A4P22310 534 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 CDC25BP30305 580 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 PTPN7P35236 360 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A3P35503 534 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 HMGCLP35914 325 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 MAPK10P53779 464 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 MPP3Q13368 585 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 CHRNA6Q15825 494 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 SEPT7Q16181 437 aaKnown RBP17.5■□□□□ 0.39
PNKP-230ENST00000638016 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.5■□□□□ 0.39
PNKP-230ENST00000638016 PEX26Q7Z412 305 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 PIM3Q86V86 326 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 PHYKPLQ8IUZ5 450 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 FSD1LQ9BXM9 530 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 RMI1Q9H9A7 625 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A7Q9HAW7 530 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A10Q9HAW8 530 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 UGT1A8Q9HAW9 530 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 KCNK4Q9NYG8 393 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 IL17CQ9P0M4 197 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 TRHDEQ9UKU6 1024 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 KCTD3Q9Y597 815 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 ARL5AQ9Y689 179 aa17.5■□□□□ 0.39
PNKP-230ENST00000638016 CHUKO15111 745 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 GPR3P46089 330 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 FASLGP48023 281 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 HHEXQ03014 270 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 EIF3IQ13347 325 aaKnown RBP17.49■□□□□ 0.39
PNKP-230ENST00000638016 SPARCL1Q14515 664 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 ANKRD20A2Q5SQ80 823 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 ARHGAP40Q5TG30 622 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 ANKRD20A1Q5TYW2 823 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 ANKRD20A3Q5VUR7 823 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 IYDQ6PHW0 289 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 DARS2Q6PI48 645 aaKnown RBP17.49■□□□□ 0.39
PNKP-230ENST00000638016 CDKL3Q8IVW4 592 aaPredicted RBP17.49■□□□□ 0.39
PNKP-230ENST00000638016 PLEKHG4BQ96PX9 1271 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 AMFRQ9UKV5 643 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 EFR3BQ9Y2G0 817 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 R3HDM2Q9Y2K5 976 aaKnown RBP17.49■□□□□ 0.39
PNKP-230ENST00000638016 ZNF106Q9H2Y7 1883 aaKnown RBP17.49■□□□□ 0.39
PNKP-230ENST00000638016 ATRXP46100 2492 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 SDK2Q58EX2 2172 aa17.49■□□□□ 0.39
PNKP-230ENST00000638016 C9orf172C9J069 976 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 EPOP01588 193 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 F3P13726 295 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 HLA-DPA1P20036 260 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 ADRA1AP35348 466 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 SPAM1P38567 509 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 MAPK9P45984 424 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 PPM1FP49593 454 aaPredicted RBP17.48■□□□□ 0.39
PNKP-230ENST00000638016 INSCQ1MX18 579 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 PDPK2PQ6A1A2 396 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 GDAP1Q8TB36 358 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 USP7Q93009 1102 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 CCDC97Q96F63 343 aaPredicted RBP17.48■□□□□ 0.39
PNKP-230ENST00000638016 SLC38A3Q99624 504 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 TBC1D10AQ9BXI6 508 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 RAD18Q9NS91 495 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 IMPACTQ9P2X3 320 aa17.48■□□□□ 0.39
PNKP-230ENST00000638016 TMX2-CTNND1H3BSU7 103 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 CDK14O94921 469 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 PRB1P04280 392 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 THRAP10827 490 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 ZNF7P17097 686 aaPredicted RBP17.47■□□□□ 0.39
PNKP-230ENST00000638016 ARSDP51689 593 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 CTSCP53634 463 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 LIMK2P53671 638 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms