RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 MRPL57Q9BQC6 102 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CA14Q9ULX7 337 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PRMT5O14744 637 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 AP5Z1O43299 807 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PAGE1O75459 146 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ALDOAP04075 364 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 KPNB1Q14974 876 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PKDCCQ504Y2 493 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ZFP1Q6P2D0 407 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MSANTD1Q6ZTZ1 278 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MCOLN2Q8IZK6 566 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ZNF611Q8N823 705 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 OR4C6Q8NH72 309 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SEMA4DQ92854 862 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 LRRC1Q9BTT6 524 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 UNC93B1Q9H1C4 597 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 C8orf33Q9H7E9 229 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CARS2Q9HA77 564 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 AGPAT5Q9NUQ2 364 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 RDH8Q9NYR8 311 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PACSIN3Q9UKS6 424 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PYCARDQ9ULZ3 195 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SLC45A1Q9Y2W3 748 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PCDHA2Q9Y5H9 948 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MYH14Q7Z406 1995 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 M0R129 80 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MUSKO15146 869 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 COQ9O75208 318 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CHRNA1P02708 482 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 KCNA3P22001 575 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 RPL22P35268 128 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MDH1P40925 334 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 GRM5P41594 1212 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 STARP49675 285 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ECT2LQ008S8 904 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PIK3R6Q5UE93 754 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SYCE2Q6PIF2 218 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 RASGRP2Q7LDG7 609 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ISCUQ9H1K1 167 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PPP1R14DQ9NXH3 145 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 GDAP2Q9NXN4 497 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 C5orf60A6NFR6 353 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 RFXANKO14593 260 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 FFAR3O14843 346 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PGRMC2O15173 223 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 GPR42O15529 346 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 AHCYP23526 432 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CXCR1P25024 350 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 RIDAP52758 137 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 C1QTNF8P60827 252 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 N4BP2L1Q5TBK1 243 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MTFR2Q6P444 385 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 LIX1LQ8IVB5 337 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ERGIC2Q96RQ1 377 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PCDHB16Q9NRJ7 776 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 EIF3KQ9UBQ5 218 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 FTSJ1Q9UET6 329 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MTF2Q9Y483 593 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 AKAP12Q02952 1782 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 MST1RQ04912 1400 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 ARL5CA6NH57 179 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 UNCXA6NJT0 531 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 CHADO15335 359 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 SSNA1O43805 119 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 DUX1O43812 170 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 CER1O95813 267 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 APOC1P02654 83 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 HRGP04196 525 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF20P17024 532 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 MPIP34949 423 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 AQP5P55064 265 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 SRP54P61011 504 aaKnown RBP6.09□□□□□ -1.44
SCN1A-217ENST00000637988 TRAF3Q13114 568 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 PLEKHG6Q3KR16 790 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 MED27Q6P2C8 311 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 SLC36A4Q6YBV0 504 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF276Q8N554 614 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 PDPRQ8NCN5 879 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF398Q8TD17 642 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 TCEAL3Q969E4 200 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 FAM83DQ9H4H8 585 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 CCDC167Q9P0B6 97 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 RSL24D1Q9UHA3 163 aaKnown RBP6.09□□□□□ -1.44
SCN1A-217ENST00000637988 PDE4DIPQ5VU43 2346 aa6.09□□□□□ -1.44
SCN1A-217ENST00000637988 DDX3YO15523 660 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 AGR2O95994 175 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ACLYP53396 1101 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 MRPS5P82675 430 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ABCA11PQ4W5N1 156 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 KIAA0895LQ68EN5 471 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CERS6Q6ZMG9 384 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SIDT2Q8NBJ9 832 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 OR6K2Q8NGY2 324 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TMEM175Q9BSA9 504 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TMEM79Q9BSE2 394 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TRIM39Q9HCM9 518 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TAGLN3Q9UI15 199 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 DNALI1O14645 258 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TP53I11O14683 189 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF185O15231 689 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms