RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 HGH1Q9BTY7 390 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 TM6SF2Q9BZW4 377 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 ZBP1Q9H171 429 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 SEMA4BQ9NPR2 832 aaPredicted RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 ABCB8Q9NUT2 735 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 GNPTGQ9UJJ9 305 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 PCTPQ9UKL6 214 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 PACSIN3Q9UKS6 424 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 IKZF3Q9UKT9 509 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 A0A0J9YYE9 177 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 ACOT8O14734 319 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 SCAMP3O14828 347 aaKnown RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 MT-CO1P00395 513 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 TRBC1P01850 177 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 ALDOCP09972 364 aaKnown RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 CTSAP10619 480 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 CA8P35219 290 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 MRPL19P49406 292 aaKnown RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 RGS4P49798 205 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 CLCN7P51798 805 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 CYP4F8P98187 520 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 TRIM25Q14258 630 aaKnown RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 RBBP7Q16576 425 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 COQ5Q5HYK3 327 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 CAPRIN2Q6IMN6 1127 aaKnown RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 OGFOD2Q6N063 350 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 CAMK1DQ8IU85 385 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 CPNE9Q8IYJ1 553 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 APCDD1Q8J025 514 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 CHCHD4Q8N4Q1 142 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 PCDH20Q8N6Y1 951 aaKnown RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 TSPEARQ8WU66 669 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 BTBD9Q96Q07 612 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 SLC30A3Q99726 388 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 HOPXQ9BPY8 73 aaPredicted RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 SARS2Q9NP81 518 aaKnown RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 GALPQ9UBC7 116 aa18.35■□□□□ 0.53
CLN8-211ENST00000636934 EVLQ9UI08 416 aaPredicted RBP18.35■□□□□ 0.53
CLN8-211ENST00000636934 HSPA8P11142 646 aaKnown RBP18.34■□□□□ 0.53
CLN8-211ENST00000636934 PEX2P28328 305 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 SERPINA4P29622 427 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 MRPS22P82650 360 aaKnown RBP18.34■□□□□ 0.53
CLN8-211ENST00000636934 MAP7D1Q3KQU3 841 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 LPCAT4Q643R3 524 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 PAOXQ6QHF9 649 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 GPRIN3Q6ZVF9 776 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 FRA10AC1Q70Z53 315 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 PHYKPLQ8IUZ5 450 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 HOMEZQ8IX15 550 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 ICA1LQ8NDH6 482 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 GATA6Q92908 595 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 ZNF382Q96SR6 550 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 FBRSL1Q9HCM7 1045 aaKnown RBP18.34■□□□□ 0.53
CLN8-211ENST00000636934 RIC8BQ9NVN3 520 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 TMEM45AQ9NWC5 275 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 POLG2Q9UHN1 485 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 DTNAQ9Y4J8 743 aa18.34■□□□□ 0.53
CLN8-211ENST00000636934 C1orf232A0A0U1RR37 186 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 E7ENX8 843 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 K7ERQ8 282 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 PPP6CO00743 305 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 ANGPT2O15123 496 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 TRIM24O15164 1050 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 TGM5O43548 720 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 BAIAP3O94812 1187 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 PRAMEF1O95521 474 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 TIMP1P01033 207 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 ALPIP09923 528 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 HGFP14210 728 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 UQCRBP14927 111 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 FOXA1P55317 472 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 ZXDBP98169 803 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 MS4A2Q01362 244 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 LMAN2Q12907 356 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 ADGRE1Q14246 886 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 GRAMD1BQ3KR37 738 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 GPR33Q49SQ1 333 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 GRAMD4Q6IC98 578 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 GAREM2Q75VX8 874 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 TMCO2Q7Z6W1 182 aaPredicted RBP18.33■□□□□ 0.53
CLN8-211ENST00000636934 SPATA24Q86W54 205 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 SERPINA9Q86WD7 417 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 TMC8Q8IU68 726 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 BBS7Q8IWZ6 715 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 CBARPQ8N350 705 aaPredicted RBP18.33■□□□□ 0.53
CLN8-211ENST00000636934 SDR39U1Q9NRG7 319 aaPredicted RBP18.33■□□□□ 0.53
CLN8-211ENST00000636934 GID8Q9NWU2 228 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 TMEM181Q9P2C4 612 aa18.33■□□□□ 0.53
CLN8-211ENST00000636934 CAPN8A6NHC0 703 aa18.32■□□□□ 0.52
CLN8-211ENST00000636934 NCF1BA6NI72 391 aaPredicted RBP18.32■□□□□ 0.52
CLN8-211ENST00000636934 NCF1CA8MVU1 366 aaPredicted RBP18.32■□□□□ 0.52
CLN8-211ENST00000636934 FGF18O76093 207 aa18.32■□□□□ 0.52
CLN8-211ENST00000636934 ADH1AP07327 375 aa18.32■□□□□ 0.52
CLN8-211ENST00000636934 CNPP09543 421 aaKnown RBP18.32■□□□□ 0.52
CLN8-211ENST00000636934 LINC00032P0C843 101 aa18.32■□□□□ 0.52
CLN8-211ENST00000636934 SPATA31D3P0C874 917 aa18.32■□□□□ 0.52
CLN8-211ENST00000636934 NCF1P14598 390 aaPredicted RBP18.32■□□□□ 0.52
CLN8-211ENST00000636934 SNRPD1P62314 119 aaKnown RBP18.32■□□□□ 0.52
CLN8-211ENST00000636934 PLEKHG6Q3KR16 790 aa18.32■□□□□ 0.52
CLN8-211ENST00000636934 SPATS1Q496A3 300 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms