RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ZNF567Q8N184 647 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 SLC25A41Q8N5S1 370 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 AGBL5Q8NDL9 886 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 GDAP1Q8TB36 358 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 SLC39A7Q92504 469 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 KRT35Q92764 455 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 USP7Q93009 1102 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 BBC3Q96PG8 261 aaPredicted RBP18.74■□□□□ 0.59
CLN6-213ENST00000636212 B3GNT4Q9C0J1 378 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 ARFGAP3Q9NP61 516 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 KLC4Q9NSK0 619 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 TBC1D29Q9UFV1 150 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 EFR3BQ9Y2G0 817 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 PCDHA3Q9Y5H8 950 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 NBEAQ8NFP9 2946 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 ARHGEF17Q96PE2 2063 aaPredicted RBP18.73■□□□□ 0.59
CLN6-213ENST00000636212 ZFYVE26Q68DK2 2539 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 PRAMEF33A0A0G2JMD5 474 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 BTNL10A8MVZ5 291 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 ERVH48-1M5A8F1 160 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 PRAMEF10O60809 474 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 ZNF189O75820 626 aaPredicted RBP18.73■□□□□ 0.59
CLN6-213ENST00000636212 ANXA9O76027 345 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 BPIP17213 487 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 VCLP18206 1134 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 CD68P34810 354 aaPredicted RBP18.73■□□□□ 0.59
CLN6-213ENST00000636212 CLCNKAP51800 687 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 GEMP55040 296 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 RWDD2BP57060 319 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 ADCY2Q08462 1091 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 COL9A2Q14055 689 aaPredicted RBP18.73■□□□□ 0.59
CLN6-213ENST00000636212 C16orf72Q14CZ0 275 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 SIRPB2Q5JXA9 342 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 TMEM71Q6P5X7 295 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 KDELC1Q6UW63 502 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 GLT6D1Q7Z4J2 308 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 ADGRG6Q86SQ4 1221 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 CDKL3Q8IVW4 592 aaPredicted RBP18.73■□□□□ 0.59
CLN6-213ENST00000636212 RCBTB1Q8NDN9 531 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 IPMKQ8NFU5 416 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 LRRC45Q96CN5 670 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 VPS35Q96QK1 796 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 ZCCHC2Q9C0B9 1178 aaKnown RBP18.73■□□□□ 0.59
CLN6-213ENST00000636212 BPIFA1Q9NP55 256 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 PKP3Q9Y446 797 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 SPO11Q9Y5K1 396 aa18.73■□□□□ 0.59
CLN6-213ENST00000636212 LAMA5O15230 3695 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 CELSR3Q9NYQ7 3312 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 F5H423 210 aaPredicted RBP18.72■□□□□ 0.59
CLN6-213ENST00000636212 CDK14O94921 469 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 EPHA4P54764 986 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 NFATC2Q13469 925 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 PRPSAP1Q14558 356 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 NOMO1Q15155 1222 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 SLC1A5Q15758 541 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.72■□□□□ 0.59
CLN6-213ENST00000636212 CRTC3Q6UUV7 619 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 ZNF574Q6ZN55 896 aaPredicted RBP18.72■□□□□ 0.59
CLN6-213ENST00000636212 ZNF761Q86XN6 746 aaPredicted RBP18.72■□□□□ 0.59
CLN6-213ENST00000636212 TRIM48Q8IWZ4 208 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 BRSK1Q8TDC3 778 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 BLOC1S5Q8TDH9 187 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 PPP1R2P1Q96PQ5 205 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 TAAR9Q96RI9 348 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 EPB41L1Q9H4G0 881 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 UNC13CQ8NB66 2214 aa18.72■□□□□ 0.59
CLN6-213ENST00000636212 KIF26BQ2KJY2 2108 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 K7ENP7 123 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 AURKAO14965 403 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 CHUKO15111 745 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 PPFIA2O75334 1257 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 TJP3O95049 919 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 ZNF7P17097 686 aaPredicted RBP18.71■□□□□ 0.59
CLN6-213ENST00000636212 FECHP22830 423 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 RBL1P28749 1068 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 SPAM1P38567 509 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 ETV5P41161 510 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 MAPK9P45984 424 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 VAV2P52735 878 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 C19orf57Q0VDD7 668 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 PLA2G4EQ3MJ16 856 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 ZNF648Q5T619 568 aaPredicted RBP18.71■□□□□ 0.59
CLN6-213ENST00000636212 INO80CQ6PI98 192 aaPredicted RBP18.71■□□□□ 0.59
CLN6-213ENST00000636212 NCSTNQ92542 709 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 MRGPRX2Q96LB1 330 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 BAG1Q99933 345 aaPredicted RBP18.71■□□□□ 0.59
CLN6-213ENST00000636212 TIMM29Q9BSF4 260 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 OSBPL8Q9BZF1 889 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 GBA3Q9H227 469 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 PRDM8Q9NQV8 689 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 SSUH2Q9Y2M2 353 aa18.71■□□□□ 0.59
CLN6-213ENST00000636212 AAR2Q9Y312 384 aaKnown RBP18.71■□□□□ 0.59
CLN6-213ENST00000636212 PCYT1BQ9Y5K3 369 aaPredicted RBP18.71■□□□□ 0.59
CLN6-213ENST00000636212 GOLGA6L9A6NEM1 432 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 PDZK1P1A8MUH7 402 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 GOLGA6L6A8MZA4 724 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 EML2O95834 649 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 VIPP01282 170 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 THRAP10827 490 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms