RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	KLF11	O14901	512 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	AKAP10	O43572	662 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	MYO1D	O94832	1006 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	PAPSS2	O95340	614 aa	Predicted RBP	13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	OAS1	P00973	400 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	ITPKA	P23677	461 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	GABRB3	P28472	473 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	HOXC13	P31276	330 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	KLHDC10	Q6PID8	442 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	GDPD4	Q6W3E5	623 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	TET1	Q8NFU7	2136 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	MZB1	Q8WU39	189 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	SCAMP4	Q969E2	229 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	THUMPD3	Q9BV44	507 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	CADM1	Q9BY67	442 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	NOL11	Q9H8H0	719 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	MRM3	Q9HC36	420 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	BAG5	Q9UL15	447 aa		13.19	□□□□□ -0.3
NRXN1-233	ENST00000630543	SCN10A	Q9Y5Y9	1956 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	PGLS	O95336	258 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ESR1	P03372	595 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	F11	P03951	625 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	LBP	P18428	481 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	LEPR	P48357	1165 aa	Known RBP	13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ULK2	Q8IYT8	1036 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	MIER2	Q8N344	545 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ZBTB2	Q8N680	514 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ANKLE1	Q8NAG6	615 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	OR13J1	Q8NGT2	312 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	CSGALNACT1	Q8TDX6	532 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	CXorf40A	Q8TE69	158 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	BRD9	Q9H8M2	597 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	GIMAP2	Q9UG22	337 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	EMCN	Q9ULC0	261 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	LDB2	O43679	373 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	FSHR	P23945	695 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	UBE2R2	Q712K3	238 aa	Predicted RBP	13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	DSG4	Q86SJ6	1040 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	C19orf60	Q96EN9	201 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	GID8	Q9NWU2	228 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	B4GALT6	Q9UBX8	382 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	EIF3L	Q9Y262	564 aa	Known RBP	13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ATXN2	Q99700	1313 aa	Known RBP	13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	RNF103-CHMP3	A0A140T963	221 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	RGSL1	A5PLK6	1076 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ECI2	O75521	394 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	CDK14	O94921	469 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ATAT1	Q5SQI0	421 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	C11orf96	Q7Z7L8	435 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	CHST14	Q8NCH0	376 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	MDGA1	Q8NFP4	955 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	TWIST2	Q8WVJ9	160 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	DNAJC9	Q8WXX5	260 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	KLK6	Q92876	244 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	DNAJC28	Q9NX36	388 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	OR4F21	O95013	312 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	ADRA1A	P35348	466 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	PGS1	Q32NB8	556 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	TRMT5	Q32P41	509 aa	Known RBP	13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	SHKBP1	Q8TBC3	707 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	C20orf27	Q9GZN8	174 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	PCDHB1	Q9Y5F3	818 aa		13.18	□□□□□ -0.3
NRXN1-233	ENST00000630543	TTC34	A8MYJ7	566 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	TRAFD1	O14545	582 aa	Predicted RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	EPB42	P16452	691 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	INO80D	Q53TQ3	878 aa	Predicted RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	CACHD1	Q5VU97	1274 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543		Q6ZVL8	140 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	HPS6	Q86YV9	775 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	MMAA	Q8IVH4	418 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	PIANP	Q8IYJ0	282 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	GFM2	Q969S9	779 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	TRMT2B	Q96GJ1	504 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	KCNA7	Q96RP8	456 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	ZBP1	Q9H171	429 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	PRKAG3	Q9UGI9	489 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	NDUFAF1	Q9Y375	327 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	PDZK1P1	A8MUH7	402 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	PIP5K1B	O14986	540 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	DHRS4L1	P0CG22	281 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	SGCG	Q13326	291 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	KRT80	Q6KB66	452 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	SNX20	Q7Z614	316 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	TREML1	Q86YW5	311 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	CENPL	Q8N0S6	344 aa	Predicted RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	GDPD5	Q8WTR4	605 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	PYCR2	Q96C36	320 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	PPP1R16A	Q96I34	528 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	NSUN5	Q96P11	429 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	PARVB	Q9HBI1	364 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	MRPL40	Q9NQ50	206 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	CLEC4E	Q9ULY5	219 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	TNPO3	Q9Y5L0	923 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	LEFTY1	O75610	366 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	WDR47	O94967	919 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	MLYCD	O95822	493 aa		13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	ATXN1L	P0C7T5	689 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-233	ENST00000630543	GDF5	P43026	501 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms