RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TRMT10CQ7L0Y3 403 aaKnown RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 DSG4Q86SJ6 1040 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 WFDC8Q8IUA0 241 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 KATNAL2Q8IYT4 538 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ATP11CQ8NB49 1132 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 MAIP1Q8WWC4 291 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ARRDC3Q96B67 414 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SYNCQ9H7C4 482 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SCML1Q9UN30 329 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PCDHGA1Q9Y5H4 931 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ICE1Q9Y2F5 2266 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 A0A1B0GVM2 712 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 E5RJQ4 531 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 J3QKU1 62 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 IRAK2O43187 625 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 THAP12O43422 761 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 LRIG2O94898 1065 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 PLA2G2AP14555 144 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 TBXAS1P24557 533 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 DRD3P35462 400 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 NSFP46459 744 aaKnown RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 LSSP48449 732 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 INSM1Q01101 510 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 MAMLD1Q13495 774 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 BROXQ5VW32 411 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 PPP1R2P3Q6NXS1 205 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 TFAP2DQ7Z6R9 452 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 FAM217AQ8IXS0 508 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 CNPY4Q8N129 248 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 RYBPQ8N488 228 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF276Q8N554 614 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 CPA5Q8WXQ8 436 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 FCRL2Q96LA5 508 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SEMA4CQ9C0C4 833 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 NOL6Q9H6R4 1146 aaKnown RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 PPANQ9NQ55 473 aaKnown RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 H2AFY2Q9P0M6 372 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 DKK4Q9UBT3 224 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 B4GALT6Q9UBX8 382 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 IP6K2Q9UHH9 426 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SLC25A13Q9UJS0 675 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 R3HDM2Q9Y2K5 976 aaKnown RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 GPR55Q9Y2T6 319 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 A0A1W2PR77 199 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 K7ERQ8 282 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 MUSKO15146 869 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 CASC3O15234 703 aaKnown RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SNAP91O60641 907 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 CSO75390 466 aaKnown RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 TCEA3O75764 348 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 FKBP9O95302 570 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 MT-CO1P00395 513 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 DRD2P14416 443 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 ITIH2P19823 946 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 DGKAP23743 735 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 TAS2R40P59535 323 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 C1orf61Q13536 156 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SKIDA1Q1XH10 827 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SETMARQ53H47 684 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 C10orf62Q5T681 223 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 FAM46CQ5VWP2 391 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 LCLAT1Q6UWP7 414 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 FKBP9P1Q75LS8 142 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 DMRTC2Q8IXT2 367 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SLC25A45Q8N413 288 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF557Q8N988 423 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 FAM181AQ8N9Y4 354 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 MFSD2AQ8NA29 543 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF248Q8NDW4 579 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 OR6K2Q8NGY2 324 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 MAPK15Q8TD08 544 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SLC35F5Q8WV83 523 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 C1orf54Q8WWF1 131 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 KCNE4Q8WWG9 221 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 TTC17Q96AE7 1141 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 SNF8Q96H20 258 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 CCDC140Q96MF4 163 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 ROPN1BQ9BZX4 212 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 CDC42EP4Q9H3Q1 356 aaKnown RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 ROPN1Q9HAT0 212 aaPredicted RBP4.86□□□□□ -1.63
LINC00550-201ENST00000629293 RELNP78509 3460 aa4.86□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 C1QTNF3-AMACRE9PGA6 284 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SLC28A2O43868 658 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 MAGEC1O60732 1142 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RNGTTO60942 597 aaKnown RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PAK4O96013 591 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 THBDP07204 575 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CHN1P15882 459 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 MMP8P22894 467 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PTPN7P35236 360 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RECQLP46063 649 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 IFI35P80217 286 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CAV1Q03135 178 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF177Q13360 481 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 DEFB133Q30KQ1 61 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 TBC1D25Q3MII6 688 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 MPP7Q5T2T1 576 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SEL1L3Q68CR1 1132 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms