RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SETMARQ53H47 684 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 TAF1BQ53T94 588 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 ARSIQ5FYB1 569 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 C9orf64Q5T6V5 341 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 BRAT1Q6PJG6 821 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 TMEM207Q6UWW9 146 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 KYAT3Q6YP21 454 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 RFLNAQ6ZTI6 216 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 CYP2U1Q7Z449 544 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 CPLX4Q7Z7G2 160 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 KDF1Q8NAX2 398 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 KDM1BQ8NB78 822 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 LRRC8CQ8TDW0 803 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 UCMAQ8WVF2 138 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 LPGAT1Q92604 370 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF75CPQ92670 426 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 EZH1Q92800 747 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 LRIG1Q96JA1 1093 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 ELMO2Q96JJ3 720 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 TSNARE1Q96NA8 513 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 C19orf43Q9BQ61 176 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 OSBPL1AQ9BXW6 950 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 NSRP1Q9H0G5 558 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 ZDHHC4Q9NPG8 344 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 IL36AQ9UHA7 158 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 CRYL1Q9Y2S2 319 aa9.44□□□□□ -0.9
PDLIM5-223ENST00000627587 DOCK9Q9BZ29 2069 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 SDK1Q7Z5N4 2213 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 TARM1B6A8C7 271 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 K7EQS6 105 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 SPINT1O43278 529 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 GSTA1P08263 222 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 NEFHP12036 1026 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 BPIP17213 487 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 NFKBIAP25963 317 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 CRABP2P29373 138 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 TNFRSF4P43489 277 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 RAB10P61026 200 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 PTSQ03393 145 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF234Q14588 700 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 PCLAFQ15004 111 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 CRY1Q16526 586 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 EOGTQ5NDL2 527 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 LRRC66Q68CR7 880 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 ATG14Q6ZNE5 492 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 NUDT18Q6ZVK8 323 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 LPCAT2Q7L5N7 544 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 PIGWQ7Z7B1 504 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 PIM3Q86V86 326 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 CCDC63Q8NA47 563 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 KCNV2Q8TDN2 545 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 TSPAN17Q96FV3 270 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 SPACA7Q96KW9 195 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 BIRC8Q96P09 236 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 TCF12Q99081 682 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 ACOX2Q99424 681 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 NUSAP1Q9BXS6 441 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 SMOC1Q9H4F8 434 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 SLC32A1Q9H598 525 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 FAM96AQ9H5X1 160 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 IL26Q9NPH9 171 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 INTS10Q9NVR2 710 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 CORO1CQ9ULV4 474 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 VPS9D1Q9Y2B5 631 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 ANKRD6Q9Y2G4 727 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 FNDC3AQ9Y2H6 1198 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 CHD8Q9HCK8 2581 aa9.43□□□□□ -0.9
PDLIM5-223ENST00000627587 TRBV5-4A0A0C4DH59 114 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 G3V2L1 256 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 OR1I1O60431 355 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 APODP05090 189 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 BPGMP07738 259 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 C1SP09871 688 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 TIMP2P16035 220 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 FDXRP22570 491 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 TTPAP49638 278 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 IRX4P78413 519 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 HNRNPA1L2Q32P51 320 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ZRANB3Q5FWF4 1079 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 AARS2Q5JTZ9 985 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 RNF187Q5TA31 235 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 HECTD2Q5U5R9 776 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 FAM45BPQ6NSW5 357 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 UNQ6494/PRO21346Q6UXR6 183 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF771Q7L3S4 317 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 LCA5Q86VQ0 697 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 SPATA6LQ8N4H0 392 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 GPR26Q8NDV2 337 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 FAM45AQ8TCE6 357 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 KCTD4Q8WVF5 259 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ANKRD49Q8WVL7 239 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 UBXN10Q96LJ8 280 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 FAM129BQ96TA1 746 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 C20orf27Q9GZN8 174 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 IGSF5Q9NSI5 407 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 B4GALT6Q9UBX8 382 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 APPL1Q9UKG1 709 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms