RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	RASSF2	P50749	326 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	MRPL12	P52815	198 aa	Known RBP	5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	RIPK4	P57078	832 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	OLIG2	Q13516	323 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	FRG1	Q14331	258 aa	Known RBP	5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	TWIST1	Q15672	202 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	DUSP6	Q16828	381 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	SLC10A5	Q5PT55	438 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	MANEA	Q5SRI9	462 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	GARNL3	Q5VVW2	1013 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	TXNDC8	Q6A555	127 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	MOB3C	Q70IA8	216 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	HORMAD2	Q8N7B1	307 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	GDPD5	Q8WTR4	605 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	ATOH1	Q92858	354 aa	Predicted RBP	5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	CFAP53	Q96M91	514 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZNF48	Q96MX3	618 aa	Predicted RBP	5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	FOXP1	Q9H334	677 aa	Predicted RBP	5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	SCPEP1	Q9HB40	452 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	PDE7B	Q9NP56	450 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	TSPYL4	Q9UJ04	414 aa		5.83	□□□□□ -1.48
NRXN1-223	ENST00000625891	TSPY2	A6NKD2	308 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	EBAG9	O00559	213 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	LIAS	O43766	372 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	RB1	P06400	928 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	CLTB	P09497	229 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	TSPY3	P0CV98	308 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	TSPY8	P0CW00	308 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	TMEM11	P17152	192 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	CHRNB2	P17787	502 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	CTPS1	P17812	591 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	TBXAS1	P24557	533 aa	Predicted RBP	5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	HOXA13	P31271	388 aa	Predicted RBP	5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	CDA	P32320	146 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	RYK	P34925	604 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	SELENOV	P59797	346 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	TSPY1	Q01534	308 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	RNPS1	Q15287	305 aa	Known RBP	5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	TSSK4	Q6SA08	328 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	PARM1	Q6UWI2	310 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	KIF6	Q6ZMV9	814 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	IRF2BP2	Q7Z5L9	587 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	GPAT4	Q86UL3	456 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	VSIG1	Q86XK7	387 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	CADM3	Q8N126	398 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	POC5	Q8NA72	575 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	CEP76	Q8TAP6	659 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	PSPC1	Q8WXF1	523 aa	Known RBP	5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	SLC25A28	Q96A46	364 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZNF333	Q96JL9	665 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	C1orf74	Q96LT6	269 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	UTP14A	Q9BVJ6	771 aa	Known RBP	5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	HEMGN	Q9BXL5	484 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	MRPL1	Q9BYD6	325 aa	Known RBP	5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	OR10A4	Q9H209	315 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	MVB12B	Q9H7P6	319 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	MKLN1	Q9UL63	735 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	NUDC	Q9Y266	331 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	PCDHAC2	Q9Y5I4	1007 aa		5.82	□□□□□ -1.48
NRXN1-223	ENST00000625891	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891		A0A1B0GUL6	1792 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	STMND1	H3BQB6	276 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	SNAP23	O00161	211 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	CHL1	O00533	1208 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	TOMM40	O96008	361 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	PSG1	P11464	419 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	PCNA	P12004	261 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	MCC	P23508	829 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	DCTD	P32321	178 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	GPR12	P47775	334 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	PPP3CC	P48454	512 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	RRP1	P56182	461 aa	Known RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	TMPRSS3	P57727	454 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	KRT83	P78385	493 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	LAMB3	Q13751	1172 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	IRF3	Q14653	427 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	PPP2R5B	Q15173	497 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	LEXM	Q3ZCV2	418 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	BMP2KL	Q5H9B9	411 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	TCP11X2	Q5H9J9	407 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	JADE1	Q6IE81	842 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	SLC16A12	Q6ZSM3	486 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	TRAPPC11	Q7Z392	1133 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	AVL9	Q8NBF6	648 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	KCTD6	Q8NC69	237 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	MCPH1	Q8NEM0	835 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	PRPF31	Q8WWY3	499 aa	Known RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZNF653	Q96CK0	615 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	SAT2	Q96F10	170 aa	Predicted RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	NYX	Q9GZU5	481 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZWILCH	Q9H900	591 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	ERVMER34-1	Q9H9K5	563 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	POLR1B	Q9H9Y6	1135 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	CCDC177	Q9NQR7	707 aa	Predicted RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	SIRT3	Q9NTG7	399 aa	Predicted RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	TAB2	Q9NYJ8	693 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	CPSF2	Q9P2I0	782 aa	Known RBP	5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms