RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CRTC1Q6UUV9 634 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 Q6ZVL8 140 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 EFL1Q7Z2Z2 1120 aaKnown RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 KDELC2Q7Z4H8 507 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 TSPAN33Q86UF1 283 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 HEATR4Q86WZ0 1026 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 RAVER1Q8IY67 606 aaKnown RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 NRSN1Q8IZ57 195 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 SYCE1Q8N0S2 351 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 UBL4BQ8N7F7 174 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 ARL10Q8N8L6 244 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 FAM46DQ8NEK8 389 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 OR6C4Q8NGE1 309 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 WDR48Q8TAF3 677 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 ARRDC2Q8TBH0 407 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 OR1E3Q8WZA6 343 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 NAT6Q93015 286 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 NXPE2Q96DL1 559 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 DEPDC7Q96QD5 511 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 MCCC1Q96RQ3 725 aaPredicted RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 SRPK1Q96SB4 655 aaKnown RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 RBM15Q96T37 977 aaKnown RBP eCLIP6.37□□□□□ -1.39
TCF4-249ENST00000625716 VAT1Q99536 393 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 BOCQ9BWV1 1114 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 HEMGNQ9BXL5 484 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 SLC25A51Q9H1U9 297 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 ABCG8Q9H221 673 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 GOLPH3Q9H4A6 298 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 SUDS3Q9H7L9 328 aaPredicted RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 SYNDIG1Q9H7V2 258 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 CARS2Q9HA77 564 aaKnown RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 RAD18Q9NS91 495 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 SIRPGQ9P1W8 387 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 KLHL8Q9P2G9 620 aaPredicted RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 SAE1Q9UBE0 346 aaPredicted RBP6.37□□□□□ -1.39
TCF4-249ENST00000625716 ADGRE2Q9UHX3 823 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 CD84Q9UIB8 345 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 PADI4Q9UM07 663 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 TFR2Q9UP52 801 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 PCDHA3Q9Y5H8 950 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 DGKBQ9Y6T7 804 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 DCHS1Q96JQ0 3298 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 TRPM6Q9BX84 2022 aa6.37□□□□□ -1.39
TCF4-249ENST00000625716 COL5A1P20908 1838 aaPredicted RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 NCOR2Q9Y618 2525 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 hCG_1818297A0A087WSY0 165 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 FAM95CA0A1B0GW59 222 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PRSS38A1L453 326 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 MACROD2A1Z1Q3 448 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 EME2A4GXA9 379 aaPredicted RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 RGSL1A5PLK6 1076 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GOLGA6L9A6NEM1 432 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 BTNL10A8MVZ5 291 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 HACD1B0YJ81 288 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PJA2O43164 708 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PAX4O43316 350 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 NRDCO43847 1150 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PMPCBO75439 489 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 ZNF189O75820 626 aaPredicted RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 STK10O94804 968 aaKnown RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 TJP3O95049 919 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CLDN7O95471 211 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 ECEL1O95672 775 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GIMD1P0DJR0 217 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GM2AP17900 193 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PTPN3P26045 913 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 TEAD1P28347 426 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CTNNA1P35221 906 aaKnown RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 CLDN6P56747 220 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GSDMDP57764 484 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CDK3Q00526 305 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 DPTQ07507 201 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PCDH1Q08174 1060 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CYP4F3Q08477 520 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 ILF3Q12906 894 aaKnown RBP eCLIP6.36□□□□□ -1.39
TCF4-249ENST00000625716 GALNT3Q14435 633 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PTPRRQ15256 657 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PPP2R5EQ16537 467 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GUSBP11Q6P575 273 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 RAD9BQ6WBX8 426 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 B4GALNT4Q76KP1 1039 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 ZNF765Q7L2R6 523 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PID1Q7Z2X4 250 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PEX26Q7Z412 305 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 TECPR1Q7Z6L1 1165 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 ZC3H18Q86VM9 953 aaKnown RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 MARCH9Q86YJ5 346 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CBARPQ8N350 705 aaPredicted RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 CNTD1Q8N815 330 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 ACRBPQ8NEB7 543 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 MDM1Q8TC05 714 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 HTR3CQ8WXA8 447 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 LRRC45Q96CN5 670 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 HAUS1Q96CS2 278 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 IMP4Q96G21 291 aaKnown RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 PDXPQ96GD0 296 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 HIC2Q96JB3 615 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 TEKT5Q96M29 485 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 OLFM3Q96PB7 478 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 RIOK2Q9BVS4 552 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms