RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CDCA2Q69YH5 1023 aaPredicted RBP16.03■□□□□ 0.16
GABRB3-215ENST00000622697 CWF19L1Q69YN2 538 aaKnown RBP16.03■□□□□ 0.16
GABRB3-215ENST00000622697 PIM3Q86V86 326 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 EBPLQ9BY08 206 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 SMPD3Q9NY59 655 aaPredicted RBP16.03■□□□□ 0.16
GABRB3-215ENST00000622697 EIF2S1P05198 315 aaKnown RBP16.03■□□□□ 0.16
GABRB3-215ENST00000622697 NR2F1P10589 423 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 ADSLP30566 484 aaPredicted RBP16.03■□□□□ 0.16
GABRB3-215ENST00000622697 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 KRT73Q86Y46 540 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 PCYT2Q99447 389 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 PDP1Q9P0J1 537 aaPredicted RBP16.03■□□□□ 0.16
GABRB3-215ENST00000622697 C5P01031 1676 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 PNMA8CA0A1B0GUJ8 204 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 A0A1W2PQ67 120 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 UROSP10746 265 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 SLC18A2Q05940 514 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 ARMC8Q8IUR7 673 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 WDTC1Q8N5D0 677 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 UXS1Q8NBZ7 420 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 HERPUD2Q9BSE4 406 aa16.03■□□□□ 0.16
GABRB3-215ENST00000622697 THG1LQ9NWX6 298 aaKnown RBP16.03■□□□□ 0.16
GABRB3-215ENST00000622697 LRRC37A3O60309 1634 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 NTSP30990 170 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 RPIAP49247 311 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 WNT7BP56706 349 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 CCDC149Q6ZUS6 474 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 TMPRSS11BQ86T26 416 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 SERPINA9Q86WD7 417 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 OR52J3Q8NH60 311 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 MOCOSQ96EN8 888 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 CLN6Q9NWW5 311 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 LRP6O75581 1613 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 J3KR12 359 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 IRAK2O43187 625 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 DUSP11O75319 330 aaKnown RBP16.02■□□□□ 0.16
GABRB3-215ENST00000622697 NDST2P52849 883 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 CACNG1Q06432 222 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 CRYBG2Q8N1P7 616 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 LIX1Q8N485 282 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 RAB23Q9ULC3 237 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 ANGPT4Q9Y264 503 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 ELFN1P0C7U0 828 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 PAX3P23760 479 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 COX10Q12887 443 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 RAB6CQ53S08 254 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 KIAA0930Q6ICG6 404 aaPredicted RBP16.02■□□□□ 0.16
GABRB3-215ENST00000622697 DSG4Q86SJ6 1040 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 RAVER1Q8IY67 606 aaKnown RBP16.02■□□□□ 0.16
GABRB3-215ENST00000622697 BRSK1Q8TDC3 778 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 UPF1Q92900 1129 aaKnown RBP eCLIP16.02■□□□□ 0.16
GABRB3-215ENST00000622697 FAXDC2Q96IV6 333 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 RAB6CQ9H0N0 254 aa16.02■□□□□ 0.16
GABRB3-215ENST00000622697 FAM124BQ9H5Z6 455 aaPredicted RBP16.02■□□□□ 0.16
GABRB3-215ENST00000622697 KIAA1522Q9P206 1035 aaPredicted RBP16.02■□□□□ 0.16
GABRB3-215ENST00000622697 ELOVL7A1L3X0 281 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 TYROBPO43914 113 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 SLC6A2P23975 617 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 YAP1P46937 504 aaKnown RBP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 PGGT1BP53609 377 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 RPS24P62847 133 aaKnown RBP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 RBM20Q5T481 1227 aaKnown RBP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 FUT10Q6P4F1 479 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 SEC14L1Q92503 715 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 FCRL5Q96RD9 977 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 SPRTNQ9H040 489 aaPredicted RBP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 CYTH4Q9UIA0 394 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 MRPS23Q9Y3D9 190 aaKnown RBP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 DLX3O60479 287 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 UMPSP11172 480 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 COL6A1P12109 1028 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 CPTPQ5TA50 214 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 RBM23Q86U06 439 aaKnown RBP16.02■□□□□ 0.15
GABRB3-215ENST00000622697 SLCO6A1Q86UG4 719 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 MYDGFQ969H8 173 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 SIGLEC10Q96LC7 697 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 OSBPL6Q9BZF3 934 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 SLC9A8Q9Y2E8 581 aa16.02■□□□□ 0.15
GABRB3-215ENST00000622697 NOL9Q5SY16 702 aaKnown RBP16.01■□□□□ 0.15
GABRB3-215ENST00000622697 PAQR3Q6TCH7 311 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 TDRD1Q9BXT4 1180 aaKnown RBP16.01■□□□□ 0.15
GABRB3-215ENST00000622697 FBXO10Q9UK96 956 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 MYH6P13533 1939 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 SLC7A4O43246 635 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 NOBOXO60393 691 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 KIR3DL1P43629 444 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 SLC18A1P54219 525 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 USP39Q53GS9 565 aaKnown RBP16.01■□□□□ 0.15
GABRB3-215ENST00000622697 SPRYD7Q5W111 196 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 KLHL17Q6TDP4 642 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 CAND1Q86VP6 1230 aaKnown RBP16.01■□□□□ 0.15
GABRB3-215ENST00000622697 AMER2Q8N7J2 671 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 FANCEQ9HB96 536 aa16.01■□□□□ 0.15
GABRB3-215ENST00000622697 POLR3BQ9NW08 1133 aaPredicted RBP16.01■□□□□ 0.15
GABRB3-215ENST00000622697 GPSM3Q9Y4H4 160 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms