RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NFYCQ13952 458 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 MBTPS1Q14703 1052 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 PTPRNQ16849 979 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TMTC4Q5T4D3 741 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 FAM171A1Q5VUB5 890 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 KRT80Q6KB66 452 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 FAM43BQ6ZT52 329 aaPredicted RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 GLT6D1Q7Z4J2 308 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 ARHGAP22Q7Z5H3 698 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 GALNT13Q8IUC8 556 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 SPPL2CQ8IUH8 684 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 ERI1Q8IV48 349 aaKnown RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 CMTR2Q8IYT2 770 aaKnown RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TBC1D21Q8IYX1 336 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TMEM199Q8N511 208 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 DPP10Q8N608 796 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TRIML2Q8N7C3 387 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TNIP2Q8NFZ5 429 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 OVCA2Q8WZ82 227 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 PPWD1Q96BP3 646 aaKnown RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 PDLIM5Q96HC4 596 aaKnown RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 BIRC8Q96P09 236 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 ZNF382Q96SR6 550 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 HGH1Q9BTY7 390 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TDRD1Q9BXT4 1180 aaKnown RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 YTHDF1Q9BYJ9 559 aaKnown RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 CRISPLD1Q9H336 500 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 CCSER2Q9H7U1 834 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 IL1RL2Q9HB29 575 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 RRAGCQ9HB90 399 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 CD320Q9NPF0 282 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TIMMDC1Q9NPL8 285 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 RIC8BQ9NVN3 520 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 NUDT4Q9NZJ9 180 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 TRMT6Q9UJA5 497 aaKnown RBP9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 DNMT3LQ9UJW3 386 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 ZNF225Q9UK10 706 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 ST14Q9Y5Y6 855 aa9.54□□□□□ -0.88
IGHV3-54-201ENST00000622166 A0A0D9SEW6 157 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 A0A1B0GTL3 188 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 A0A1B0GVG6 124 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 SAC3D1A6NKF1 404 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ARNTLO00327 626 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 IFRD1O00458 451 aaPredicted RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ACOX3O15254 700 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CA12O43570 354 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 SNX2O60749 519 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 SLC22A3O75751 556 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CCND3P30281 292 aaPredicted RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ATP5C1P36542 298 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 SLC11A2P49281 568 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 POLR2JP52435 117 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 HK3P52790 923 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 DIO3P55073 304 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ADARP55265 1226 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 EMX2Q04743 252 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 LIPEQ05469 1076 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ELAVL2Q12926 359 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CAPRIN1Q14444 709 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 PCBP2Q15366 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 GPR162Q16538 588 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 GEN1Q17RS7 908 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 SLC36A3Q495N2 470 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 AASDHQ4L235 1098 aaPredicted RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 PAGE3Q5JUK9 113 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CTSL3PQ5NE16 218 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 IL31Q6EBC2 164 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 RNF19BQ6ZMZ0 732 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 GPRIN3Q6ZVF9 776 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 PROSER1Q86XN7 944 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 GPSM1Q86YR5 675 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 EPHX4Q8IUS5 362 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CFAP52Q8N1V2 620 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CBR4Q8N4T8 237 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 PDZD8Q8NEN9 1154 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 FAM110BQ8TC76 370 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 DIS3LQ8TF46 1054 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ISG20Q96AZ6 181 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 PLD4Q96BZ4 506 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 RMDN1Q96DB5 314 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ZNF512Q96ME7 567 aaPredicted RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 SLC30A3Q99726 388 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ARHGAP39Q9C0H5 1083 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CWH43Q9H720 699 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CAAP1Q9H8G2 361 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 SEMA4BQ9NPR2 832 aaPredicted RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 HEBP1Q9NRV9 189 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 MARCH5Q9NX47 278 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 GALPQ9UBC7 116 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 HSFX1Q9UBD0 423 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 RSL24D1Q9UHA3 163 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ZNF639Q9UID6 485 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ANAPC2Q9UJX6 822 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 AGO1Q9UL18 857 aaKnown RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 TIMM22Q9Y584 194 aa9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 ZFP37Q9Y6Q3 630 aaPredicted RBP9.53□□□□□ -0.88
IGHV3-54-201ENST00000622166 CCDC160A6NGH7 325 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms