RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CHST15Q7LFX5 561 aaPredicted RBP18.07■□□□□ 0.48
LITAF-220ENST00000620789 NLRP9Q7RTR0 991 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 SNX20Q7Z614 316 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 SLC35F3Q8IY50 421 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 FAM46DQ8NEK8 389 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 PPHLN1Q8NEY8 458 aaKnown RBP18.07■□□□□ 0.48
LITAF-220ENST00000620789 CDKN2AIPNLQ96HQ2 116 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 ZCCHC2Q9C0B9 1178 aaKnown RBP18.07■□□□□ 0.48
LITAF-220ENST00000620789 IL22Q9GZX6 179 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 EVA1BQ9NVM1 165 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 BFARQ9NZS9 450 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 PLEKHM1Q9Y4G2 1056 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 PCDHGA1Q9Y5H4 931 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 SLC30A1Q9Y6M5 507 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 PLXNB3Q9ULL4 1909 aa18.07■□□□□ 0.48
LITAF-220ENST00000620789 SPEGQ15772 3267 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 MED19A0JLT2 244 aaPredicted RBP18.06■□□□□ 0.48
LITAF-220ENST00000620789 RFPL3O75679 317 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 TRIM16O95361 564 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 MYF5P13349 255 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 ACTR1BP42025 376 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 RPIAP49247 311 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 ACTR1AP61163 376 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 DR1Q01658 176 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 GTF2H3Q13889 308 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 NR0B2Q15466 257 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 GPR33Q49SQ1 333 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 PCID2Q5JVF3 399 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 TSTD2Q5T7W7 516 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 SLC30A9Q6PML9 568 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 SYDE1Q6ZW31 735 aaPredicted RBP18.06■□□□□ 0.48
LITAF-220ENST00000620789 ARL10Q8N8L6 244 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 PNPLA1Q8N8W4 532 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 OR13J1Q8NGT2 312 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 PEX13Q92968 403 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 ULK4Q96C45 1275 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 TTC25Q96NG3 672 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 SPATS2LQ9NUQ6 558 aaKnown RBP18.06■□□□□ 0.48
LITAF-220ENST00000620789 TAAR2Q9P1P5 351 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 SIRPGQ9P1W8 387 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 ASIC3Q9UHC3 531 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 CRLS1Q9UJA2 301 aa18.06■□□□□ 0.48
LITAF-220ENST00000620789 ARSDP51689 593 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 CRADDP78560 199 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 ACVR1Q04771 509 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 ILKQ13418 452 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 CCDC157Q569K6 752 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 ZRANB3Q5FWF4 1079 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 OGFOD3Q6PK18 319 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 CRTC3Q6UUV7 619 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 LRRTM4Q86VH4 590 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 PPIL6Q8IXY8 311 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 NXPE1Q8N323 547 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 NAT8LQ8N9F0 302 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 KYQ8NBH2 561 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 MCUQ8NE86 351 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 GPR156Q8NFN8 814 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 ADAMTS14Q8WXS8 1223 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 ZNF778Q96MU6 729 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 DPEP2Q9H4A9 486 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 GULP1Q9UBP9 304 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 SLC2A6Q9UGQ3 507 aa18.05■□□□□ 0.48
LITAF-220ENST00000620789 NCOR2Q9Y618 2525 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 TRBV5-4A0A0C4DH59 114 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 EME2A4GXA9 379 aaPredicted RBP18.04■□□□□ 0.48
LITAF-220ENST00000620789 B4DGG1 531 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 KMOO15229 486 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 NOBOXO60393 691 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 CDK4P11802 303 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 MLNP12872 115 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 ACP5P13686 325 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 MSH3P20585 1137 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 MGAT1P26572 445 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 AKT1P31749 480 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 CACNG1Q06432 222 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 FOXC1Q12948 553 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 DHX34Q14147 1143 aaKnown RBP18.04■□□□□ 0.48
LITAF-220ENST00000620789 RNASEH2BQ5TBB1 312 aaKnown RBP18.04■□□□□ 0.48
LITAF-220ENST00000620789 GUSBP11Q6P575 273 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 MICALCLQ6ZW33 695 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 CAND1Q86VP6 1230 aaKnown RBP18.04■□□□□ 0.48
LITAF-220ENST00000620789 JAMLQ86YT9 394 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 ZNF547Q8IVP9 402 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 RASGEF1AQ8N9B8 481 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 SPATA4Q8NEY3 305 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 HDAC10Q969S8 669 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 KRT12Q99456 494 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 FAM96AQ9H5X1 160 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 XAB2Q9HCS7 855 aaKnown RBP18.04■□□□□ 0.48
LITAF-220ENST00000620789 CHRAC1Q9NRG0 131 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 SYBUQ9NX95 663 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 PADI4Q9UM07 663 aa18.04■□□□□ 0.48
LITAF-220ENST00000620789 GOLGA4Q13439 2230 aaKnown RBP18.03■□□□□ 0.48
LITAF-220ENST00000620789 CCDC162PA2VCL2 907 aa18.03■□□□□ 0.48
LITAF-220ENST00000620789 CPED1A4D0V7 1026 aa18.03■□□□□ 0.48
LITAF-220ENST00000620789 GOLGA8MH3BSY2 632 aa18.03■□□□□ 0.48
LITAF-220ENST00000620789 DNALI1O14645 258 aaPredicted RBP18.03■□□□□ 0.48
LITAF-220ENST00000620789 TTI1O43156 1089 aa18.03■□□□□ 0.48
LITAF-220ENST00000620789 AVILO75366 819 aa18.03■□□□□ 0.48
LITAF-220ENST00000620789 GP1BAP07359 652 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms