RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 ZYG11AQ6WRX3 759 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 UTS2BQ765I0 119 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 UMODL1-AS1Q8N2C9 162 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 FAM110BQ8TC76 370 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 CDK15Q96Q40 435 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 MID1IP1Q9NPA3 183 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 FAM149AA5PLN7 773 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 PRR23AA6NEV1 266 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 OR6C75A6NL08 312 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 H3BNH8 94 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 PER2O15055 1255 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 AKAP10O43572 662 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 LINC00032P0C843 101 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 SGO1Q5FBB7 561 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 PIGGQ5H8A4 983 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 BORAQ6PGQ7 559 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 ZBTB49Q6ZSB9 765 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 NANOGNBQ7Z5D8 188 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 CILP2Q8IUL8 1156 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 C7orf61Q8IZ16 206 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 RANBP9Q96S59 729 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 HEPHQ9BQS7 1158 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 GPR63Q9BZJ6 419 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 TMEM248Q9NWD8 314 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 AGO1Q9UL18 857 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 C1orf232A0A0U1RR37 186 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 E5RI56 91 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 STX7O15400 261 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 INSIG1O15503 277 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 TLL1O43897 1013 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 ZNF26P17031 533 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 RECQLP46063 649 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 YAP1P46937 504 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 BCAP31P51572 246 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 INSCQ1MX18 579 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 EPGNQ6UW88 154 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 DNAJB7Q7Z6W7 309 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 DDX53Q86TM3 631 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 FIBCD1Q8N539 461 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 TMEM102Q8N9M5 508 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 OR4L1Q8NH43 312 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 NUDT8Q8WV74 236 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 CLSTN3Q9BQT9 956 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 OLAHQ9NV23 265 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 BCAP29Q9UHQ4 241 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 EVLQ9UI08 416 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 RAP2CQ9Y3L5 183 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 RAD54BQ9Y620 910 aa14.38□□□□□ -0.11
SHROOM1-208ENST00000617339 ZNF840PA6NDX5 716 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 ZNF839A8K0R7 811 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 A8MT66 165 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 CDH3P22223 829 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 AGTR2P50052 363 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 RHOAP61586 193 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 CBX2Q14781 532 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 NR1D2Q14995 579 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 TSNQ15631 228 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 PDCD4Q53EL6 469 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 MSANTD2Q6P1R3 559 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 FAM151BQ6UXP7 276 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 CYS1Q717R9 158 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 LSMEM2Q8N112 164 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 CYGBQ8WWM9 190 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 GPR21Q99679 349 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 C1QTNF1Q9BXJ1 281 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 SPATA7Q9P0W8 599 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 AURKCQ9UQB9 309 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 RAI2Q9Y5P3 530 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 TDRD15B5MCY1 1934 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 USP34Q70CQ2 3546 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 CDC7O00311 574 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 BTN3A1O00481 513 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 GRID2O43424 1007 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 TRIM16O95361 564 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 LTA4HP09960 611 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 C1QTNF8P60827 252 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 PFKPQ01813 784 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 CYP2A13Q16696 494 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 DCDC5Q6ZRR9 648 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 SETD3Q86TU7 594 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 TICAM1Q8IUC6 712 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 OFCC1Q8IZS5 231 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 WFDC5Q8TCV5 224 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 PTERQ96BW5 349 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 VPS50Q96JG6 964 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 STN1Q9H668 368 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 CATSPERZQ9NTU4 200 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 VCANP13611 3396 aa14.37□□□□□ -0.11
SHROOM1-208ENST00000617339 LDB2O43679 373 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 FAM189BP81408 668 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 IRF5Q13568 498 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 NANOGP8Q6NSW7 305 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 NECAB2Q7Z6G3 386 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 PIANPQ8IYJ0 282 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 SIDT2Q8NBJ9 832 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 C2CD4AQ8NCU7 369 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 STYXQ8WUJ0 223 aa14.36□□□□□ -0.11
SHROOM1-208ENST00000617339 CDKN2AIPNLQ96HQ2 116 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms