RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 BCAT1P54687 386 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 MLLT10P55197 1068 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC8B1Q6J4K2 584 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 PMF1Q6P1K2 205 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 PAQR9Q6ZVX9 377 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 PSTKQ8IV42 348 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 DDIASQ8IXT1 998 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 DCP1BQ8IZD4 617 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 MINDY1Q8N5J2 469 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 ATP6V0D2Q8N8Y2 350 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 KHSRPQ92945 711 aaKnown RBP eCLIP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 TTYH1Q9H313 450 aaPredicted RBP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC27A5Q9Y2P5 690 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 C16orf96A6NNT2 1141 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 EI24O14681 340 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 SOAT2O75908 522 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 AP2A1O95782 977 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 ARL4AP40617 200 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 GALNT1Q10472 559 aaPredicted RBP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 BST2Q10589 180 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 GRM3Q14832 879 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 PKDCCQ504Y2 493 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 CCDC126Q96EE4 140 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 MRPL46Q9H2W6 279 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 PRDM12Q9H4Q4 367 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 PIH1D1Q9NWS0 290 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 ACOT9Q9Y305 439 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 NDUFAF1Q9Y375 327 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 EYSQ5T1H1 3165 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 TPD52L2O43399 206 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 BEST1O76090 585 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 SCNN1AP37088 669 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 MAP3K7CLP57077 242 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 FOXM1Q08050 763 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 XAF1Q6GPH4 301 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 TMEM214Q6NUQ4 689 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 ADGRD2Q7Z7M1 963 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 FAM35AQ86V20 835 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 ZC3HC1Q86WB0 502 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 SPATA2LQ8IUW3 424 aaPredicted RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 TBC1D21Q8IYX1 336 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 USP33Q8TEY7 942 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 HDAC10Q969S8 669 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 MOCOSQ96EN8 888 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 EHD1Q9H4M9 534 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 TMEM30AQ9NV96 361 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 THG1LQ9NWX6 298 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 SFMBT1Q9UHJ3 866 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 CCDC78A2IDD5 438 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 AP3B1O00203 1094 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 AREL1O15033 823 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 VNN2O95498 520 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC35E2BP0CK96 405 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 ATP5F1P24539 256 aaPredicted RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 POLR2IP36954 125 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 USP10Q14694 798 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 SKIV2LQ15477 1246 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 UGP2Q16851 508 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 OFCC1Q8IZS5 231 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 CCNYL1Q8N7R7 359 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 PIK3C3Q8NEB9 887 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 OR52K1Q8NGK4 314 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC35F5Q8WV83 523 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 KCTD4Q8WVF5 259 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 KLHL5Q96PQ7 755 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 LGMNQ99538 433 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 CRISPLD1Q9H336 500 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 XPR1Q9UBH6 696 aa21.78■■□□□ 1.08
POLR2J3-220ENST00000613744 MTMR11A4FU01 709 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 MSI1O43347 362 aaKnown RBP21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 GFAPP14136 432 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 GABARAPL2P60520 117 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 GPR17Q13304 367 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 TSTD2Q5T7W7 516 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 LINC00523Q86TU6 105 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC7A5P1Q8MH63 180 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 CENPLQ8N0S6 344 aaPredicted RBP21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 ZNF567Q8N184 647 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 CSF3RQ99062 836 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 MRPL57Q9BQC6 102 aaKnown RBP21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 DUSP16Q9BY84 665 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 LHPPQ9H008 270 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 GTSE1Q9NYZ3 720 aa21.77■■□□□ 1.08
POLR2J3-220ENST00000613744 TMEM233B4DJY2 109 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 DEAF1O75398 565 aaPredicted RBP21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 NCAM1P13591 858 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 NPR3P17342 541 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 STX1BP61266 288 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 CDC20Q12834 499 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 DUSP4Q13115 394 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 GRIN2CQ14957 1233 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 PLEKHG7Q6ZR37 379 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 OSCP1Q8WVF1 389 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 FKBP10Q96AY3 582 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 MFSD3Q96ES6 412 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 GPR78Q96P69 363 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 FNIP2Q9P278 1114 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 COL4A4P53420 1690 aaPredicted RBP21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 NME4O00746 187 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms