RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 LONRF2Q1L5Z9 754 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 AMZ1Q400G9 498 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 PHF19Q5T6S3 580 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 BROXQ5VW32 411 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 CRTC3Q6UUV7 619 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 C4orf22Q6V702 233 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 RANBP10Q6VN20 620 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 NRROSQ86YC3 692 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 SLC13A5Q86YT5 568 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 NAGSQ8N159 534 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 DNAAF3Q8N9W5 541 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 HEXDCQ8WVB3 486 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ULK4Q96C45 1275 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 DCUN1D1Q96GG9 259 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ATXN7L3BQ96GX2 97 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 LIN37Q96GY3 246 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF514Q96K75 400 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 CMKLR1Q99788 373 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 C19orf43Q9BQ61 176 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 TIMM29Q9BSF4 260 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 KLC4Q9NSK0 619 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 CRLS1Q9UJA2 301 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 CNOT6Q9ULM6 557 aaKnown RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 SATB2Q9UPW6 733 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 KCNK6Q9Y257 313 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ZKSCAN5Q9Y2L8 839 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 RAXQ9Y2V3 346 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 PRKAB1Q9Y478 270 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 PCDHB1Q9Y5F3 818 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 PCDHGA8Q9Y5G5 932 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ENTPD2Q9Y5L3 495 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 OAS3Q9Y6K5 1087 aaKnown RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 SLC30A1Q9Y6M5 507 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 A0A0U1RQJ8 604 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 DUX1O43812 170 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 PRAMEF1O95521 474 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 FUCA1P04066 466 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 F3P13726 295 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ITGALP20701 1170 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 IDSP22304 550 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 CCKBRP32239 447 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ABCG1P45844 678 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 FASLGP48023 281 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 CLCNKAP51800 687 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 TMEM115Q12893 351 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-208ENST00000612050 TBC1D25Q3MII6 688 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ATP13A5Q4VNC0 1218 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 FAM182AQ5T1J6 154 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 TMEM164Q5U3C3 297 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF449Q6P9G9 518 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 PPP1R21Q6ZMI0 780 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 RAB11FIP2Q7L804 512 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ADGRG6Q86SQ4 1221 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 FBXO39Q8N4B4 442 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 TTC30BQ8N4P2 665 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF248Q8NDW4 579 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 OR4K2Q8NGD2 314 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 SLC35B2Q8TB61 432 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF398Q8TD17 642 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 EID2BQ96D98 161 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 TTC1Q99614 292 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 EPB41L1Q9H4G0 881 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ASB8Q9H765 288 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ARFGAP3Q9NP61 516 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 IL26Q9NPH9 171 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 PPP2R2CQ9Y2T4 447 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 ARL5AQ9Y689 179 aa12.18□□□□□ -0.46
CBWD3-208ENST00000612050 TPRP12270 2363 aaKnown RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 SCN8AQ9UQD0 1980 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 F8W8V4 182 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 AP3B1O00203 1094 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 BUD23O43709 281 aaKnown RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 LIASO43766 372 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 DXOO77932 396 aaKnown RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 VIPP01282 170 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF7P17097 686 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 CCZ1BP86790 482 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 CCZ1P86791 482 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 SEPT6Q14141 434 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 CHRNA6Q15825 494 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 PLA2G4EQ3MJ16 856 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF438Q7Z4V0 828 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 C17orf82Q86X59 251 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 SFRP1Q8N474 314 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 BEND7Q8N7W2 519 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 SLC37A2Q8TED4 501 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 NAP1L3Q99457 506 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 VPS37BQ9H9H4 285 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 ARNT2Q9HBZ2 717 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 SARS2Q9NP81 518 aaKnown RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 SMOXQ9NWM0 555 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 PAK5Q9P286 719 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms