RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SERPINA12Q8IW75 414 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC117Q8IWD4 279 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 CENPSQ8N2Z9 138 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TERB1Q8NA31 727 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 C12orf50Q8NA57 414 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 ATAD1Q8NBU5 361 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 LHFPL5Q8TAF8 219 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TEX47Q8TBZ9 253 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF596Q8TC21 504 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PDCD6IPQ8WUM4 868 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 RAD9AQ99638 391 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DPH2Q9BQC3 489 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 OSGEPL1Q9H4B0 414 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DPEP3Q9H4B8 488 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DIABLOQ9NR28 239 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 POLE3Q9NRF9 147 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PLK2Q9NYY3 685 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 NCKIPSDQ9NZQ3 722 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 GMEB2Q9UKD1 530 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 NUP50Q9UKX7 468 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 KCNH3Q9ULD8 1083 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 STARD13Q9Y3M8 1113 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ARFGEF2Q9Y6D5 1785 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR17Q8IZU2 1322 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A1W2PN81 502 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ADCY6O43306 1168 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DNPH1O43598 174 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PI15O43692 258 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 NOBOXO60393 691 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 JAK2O60674 1132 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 AKAP3O75969 853 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TGM6O95932 706 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 MT-ATP6P00846 226 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CHRNA1P02708 482 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM228BP0C875 321 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CPN2P22792 545 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CDC25AP30304 524 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 LCN1P31025 176 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 RFC2P35250 354 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CHRNA7P36544 502 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ECT2LQ008S8 904 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 IFITM2Q01629 132 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PTH1RQ03431 593 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 LCP2Q13094 533 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 EDRF1Q3B7T1 1238 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC9B1Q4ZJI4 515 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 HIKESHIQ53FT3 197 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 WIPI1Q5MNZ9 446 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 MAP1SQ66K74 1059 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 RBM44Q6ZP01 1051 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM83HQ6ZRV2 1179 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 CHST3Q7LGC8 479 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 RALGPS2Q86X27 583 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 C12orf56Q8IXR9 622 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DSELQ8IZU8 1212 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 BVESQ8NE79 360 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 BBS10Q8TAM1 723 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SETD6Q8TBK2 473 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC44A1Q8WWI5 657 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CFHR4Q92496 578 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CORO2AQ92828 525 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 UTP4Q969X6 686 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 MTFMTQ96DP5 389 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 MED15Q96RN5 788 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SRSF8Q9BRL6 282 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 C17orf80Q9BSJ5 609 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TRIM54Q9BYV2 358 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC26A1Q9H2B4 701 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 S100A14Q9HCY8 104 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ABCB8Q9NUT2 735 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TBC1D13Q9NVG8 400 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 NXF1Q9UBU9 619 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 DCDC2Q9UHG0 476 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 GNPTGQ9UJJ9 305 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 GGA1Q9UJY5 639 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PLCL2Q9UPR0 1127 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 GPR55Q9Y2T6 319 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDHB1Q9Y5F3 818 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDHGB1Q9Y5G3 927 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TAF1LQ8IZX4 1826 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ADGRF5Q8IZF2 1346 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 KDM3AQ9Y4C1 1321 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ILVBLA1L0T0 632 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM171A2A8MVW0 826 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 C22orf46C9J442 243 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ATP6V1G2-DDX39BF2Z307 99 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 IFNL4K9M1U5 179 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 CTDSP2O14595 271 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 CDC123O75794 336 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 NTSR2O95665 410 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 DDAH2O95865 285 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SNRPB2P08579 225 aaKnown RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 GM2AP17900 193 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 TNFRSF1AP19438 455 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 PTPN4P29074 926 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 HOXA6P31267 233 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 GPR15P49685 360 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 VAMP2P63027 116 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MYL5Q02045 173 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 GAD2Q05329 585 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms