RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CASRP41180 1078 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 CD86P42081 329 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 UBE2IP63279 158 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 FANCCQ00597 558 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 IGFBP7Q16270 282 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 ATP13A4Q4VNC1 1196 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 ZNF569Q5MCW4 686 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 WASH2PQ6VEQ5 465 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 TMC3Q7Z5M5 1100 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 ZNF761Q86XN6 746 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 C9orf43Q8TAL5 461 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 CTNNBL1Q8WYA6 563 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 C9orf72Q96LT7 481 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 RNF157Q96PX1 679 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 SMIM14Q96QK8 99 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 ANP32EQ9BTT0 268 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 MAK16Q9BXY0 300 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 EPN3Q9H201 632 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 WASH6PQ9NQA3 447 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 DTLQ9NZJ0 730 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 ATXN10Q9UBB4 475 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 KCTD3Q9Y597 815 aa17.59■□□□□ 0.41
SHKBP1-227ENST00000602011 NKX2-8O15522 239 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 MMP2P08253 660 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 VCLP18206 1134 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 TCN2P20062 427 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 KDELR1P24390 212 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 HNRNPH3P31942 346 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 GBE1Q04446 702 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 CDC20Q12834 499 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 PDK1Q15118 436 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 ZFYVE27Q5T4F4 411 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 ABRAXAS1Q6UWZ7 409 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 TMEM26Q6ZUK4 368 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 BZW1Q7L1Q6 419 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 NT5DC3Q86UY8 548 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 TRIM48Q8IWZ4 208 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 PQLC3Q8N755 202 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 DTX3LQ8TDB6 740 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 PLEKHG4BQ96PX9 1271 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 TIMM29Q9BSF4 260 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 SPATA16Q9BXB7 569 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 KLC4Q9NSK0 619 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 POT1Q9NUX5 634 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 PRKAB1Q9Y478 270 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 ADGRG1Q9Y653 693 aa17.58■□□□□ 0.4
SHKBP1-227ENST00000602011 LOC101059948A0A1B0GTJ6 334 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 UBXN7O94888 489 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 DLGAP3O95886 979 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 MT-ND3P03897 115 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 TPM3P06753 285 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 ZNF8P17098 575 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 AMD1P17707 334 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 STAT5AP42229 794 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 ARHGAP25P42331 645 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC10A2Q12908 348 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 AGAP9Q5VTM2 703 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 ZDHHC20Q5W0Z9 365 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 TIPARPQ7Z3E1 657 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 LRRTM4Q86VH4 590 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 BPHLQ86WA6 291 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 LURAP1LQ8IV03 231 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 BRSK1Q8TDC3 778 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 CPLX3Q8WVH0 158 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 GLYATL1Q969I3 302 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 IMP4Q96G21 291 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 ZDHHC12Q96GR4 267 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 CTRCQ99895 268 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC25A51Q9H1U9 297 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 OR2AG1Q9H205 316 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 PRDM8Q9NQV8 689 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 SIDT1Q9NXL6 827 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 ANKMY1Q9P2S6 941 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 EPHA6Q9UF33 1036 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 KCND3Q9UK17 655 aa17.57■□□□□ 0.4
SHKBP1-227ENST00000602011 LRRK2Q5S007 2527 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 PPP1R12AO14974 1030 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 ZNF7P17097 686 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 IDSP22304 550 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 MAPK9P45984 424 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 CDK18Q07002 472 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC18A3Q16572 532 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 C6orf15Q6UXA7 325 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 CNTD1Q8N815 330 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 STARD8Q92502 1023 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 SEC14L1Q92503 715 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 FCRL4Q96PJ5 515 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 VPS35Q96QK1 796 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 TRIB3Q96RU7 358 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 TBC1D10AQ9BXI6 508 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 GPR63Q9BZJ6 419 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 RAB33BQ9H082 229 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 TRABDQ9H4I3 376 aa17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 ZNF768Q9H5H4 540 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 PCYT1BQ9Y5K3 369 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-227ENST00000602011 RPS6KL1Q9Y6S9 549 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms