RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 PDX1P52945 283 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 TMEM115Q12893 351 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 SNX1Q13596 522 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 ITGA9Q13797 1035 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 DRICH1Q6PGQ1 229 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 IYDQ6PHW0 289 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 FAM151BQ6UXP7 276 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 LRRTM4Q86VH4 590 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 CCNJLQ8IV13 435 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZNF547Q8IVP9 402 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 REXO1L1PQ8IX06 675 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 SFRP1Q8N474 314 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 OR4K2Q8NGD2 314 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZNF398Q8TD17 642 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 MAIP1Q8WWC4 291 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 SMOXQ9NWM0 555 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 TBC1D29Q9UFV1 150 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 SLC23A2Q9UGH3 650 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 KCNK6Q9Y257 313 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZKSCAN5Q9Y2L8 839 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 JRKLQ9Y4A0 524 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 APC2O95996 2303 aa13.3□□□□□ -0.28
ARHGEF1-222ENST00000600517 CACNA1BQ00975 2339 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 RHPN2P1A8MT19 583 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 AGAP14A8MT82 685 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 TMX2-CTNND1H3BSU7 103 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 KMOO15229 486 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZW10O43264 779 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZSCAN12O43309 604 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 LDB2O43679 373 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 CEP104O60308 925 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 IFNB1P01574 187 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZNF7P17097 686 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 CA5AP35218 305 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 FDFT1P37268 417 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 FASLGP48023 281 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 XIAPP98170 497 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 SQSTM1Q13501 440 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 CLPPQ16740 277 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 LDLRAP1Q5SW96 308 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 GPRC6AQ5T6X5 926 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 C11orf96Q7Z7L8 435 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 LINC00523Q86TU6 105 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 LSMEM2Q8N112 164 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 TAB3Q8N5C8 712 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 DDHD1Q8NEL9 900 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 GDAP1Q8TB36 358 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 SLC37A2Q8TED4 501 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 ATXN7L3BQ96GX2 97 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 TTC25Q96NG3 672 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 TIMM29Q9BSF4 260 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 KCNF1Q9H3M0 494 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 POLR1BQ9H9Y6 1135 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 ETNK1Q9HBU6 452 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 KLC4Q9NSK0 619 aa13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 DSPP15924 2871 aaKnown RBP13.29□□□□□ -0.28
ARHGEF1-222ENST00000600517 TRBV23OR9-2A0A075B6M9 112 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 A0A1W2PNU3 283 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 OR5K4A6NMS3 321 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 D6RAR5 112 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 SNX2O60749 519 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 KCNJ13O60928 360 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 SRP72O76094 671 aaKnown RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 DXOO77932 396 aaKnown RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 SUN1O94901 812 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 PRAMEF1O95521 474 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 MPOP05164 745 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 F3P13726 295 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 SLC2A4P14672 509 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 ETS1P14921 441 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 TPH1P17752 444 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 CD1CP29017 333 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 ALDH4A1P30038 563 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 CXCR5P32302 372 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 HADHAP40939 763 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZNF140P52738 457 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 OR1D5P58170 312 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 BIRC2Q13490 618 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 LONRF2Q1L5Z9 754 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 IGF2-ASQ6U949 168 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 CRTC3Q6UUV7 619 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 B3GNT8Q7Z7M8 397 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 RASGEF1AQ8N9B8 481 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 GLIS1Q8NBF1 620 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 OR13C4Q8NGS5 318 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 ANP32BQ92688 251 aaKnown RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 PDLIM2Q96JY6 352 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 ZCCHC2Q9C0B9 1178 aaKnown RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 ASB8Q9H765 288 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 SYNDIG1Q9H7V2 258 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 SARS2Q9NP81 518 aaKnown RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 HOMER3Q9NSC5 361 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 FKBPLQ9UIM3 349 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 RAXQ9Y2V3 346 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 DNMT3AQ9Y6K1 912 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 CHD6Q8TD26 2715 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 RP1P56715 2156 aa13.28□□□□□ -0.28
ARHGEF1-222ENST00000600517 ACACAQ13085 2346 aa13.27□□□□□ -0.28
ARHGEF1-222ENST00000600517 KIR2DS5A0A0G2JLQ3 304 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms