RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 NDUFA10O95299 355 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 CD48P09326 243 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 TYRP1P17643 537 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 NELFEP18615 380 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 CES1P23141 567 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 NFKBIAP25963 317 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ARL4AP40617 200 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 PRKCIP41743 596 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 MAPK9P45984 424 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SEPHS1P49903 392 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 CDH6P55285 790 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 RPL26P61254 145 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 SLC25A11Q02978 314 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 UBXN1Q04323 297 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 FOXM1Q08050 763 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 GALNT2Q10471 571 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SLC10A2Q12908 348 aaPredicted RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 MMRN1Q13201 1228 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 DNASE1L3Q13609 305 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 PAFAH1B3Q15102 231 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 SMTNL2Q2TAL5 461 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
VRK3-220ENST00000600259 NADK2Q4G0N4 442 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 KHDC1Q4VXA5 237 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 FAM182AQ5T1J6 154 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 PPP1R2P3Q6NXS1 205 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 WASH2PQ6VEQ5 465 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ZNF517Q6ZMY9 492 aaPredicted RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 PRSS42Q7Z5A4 293 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 C11orf96Q7Z7L8 435 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ADGRG6Q86SQ4 1221 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ZNF547Q8IVP9 402 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 BBS5Q8N3I7 341 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ATPAF2Q8N5M1 289 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 CNTD1Q8N815 330 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 Q8NA96 180 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 GPR26Q8NDV2 337 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SSC4DQ8WTU2 575 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 CT55Q8WUE5 264 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 TEKT4Q8WW24 435 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SLC41A2Q96JW4 573 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 FCRL4Q96PJ5 515 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 OR6C1Q96RD1 312 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 TDRD1Q9BXT4 1180 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 ULBP3Q9BZM4 244 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 RAB33BQ9H082 229 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 NUP62CLQ9H1M0 184 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 HAUS4Q9H6D7 363 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 TRIM39Q9HCM9 518 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SLC40A1Q9NP59 571 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ARFGAP3Q9NP61 516 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 LHX9Q9NQ69 397 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 WASH6PQ9NQA3 447 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 AIPL1Q9NZN9 384 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 CNOT8Q9UFF9 292 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 AMACRQ9UHK6 382 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 METRNQ9UJH8 293 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 KCND3Q9UK17 655 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 RPL26L1Q9UNX3 145 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 PCDHB3Q9Y5E6 796 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ANKRD17O75179 2603 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 ESPL1Q14674 2120 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SHANK1Q9Y566 2161 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 IGHV5-51A0A0C4DH38 117 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 PIPSLA2A3N6 862 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 CDC14CA4D256 554 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 TTLL8A6PVC2 850 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 C21orf140B9A014 251 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 MFSD11O43934 449 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 AGFG2O95081 481 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 HLA-DQB2P05538 268 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 CCDC172P0C7W6 258 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 SLC2A4P14672 509 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 FOLR1P15328 257 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 ZNF7P17097 686 aaPredicted RBP6.01□□□□□ -1.45
VRK3-220ENST00000600259 DESP17661 470 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 CCNCP24863 283 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 GARSP41250 739 aaKnown RBP6.01□□□□□ -1.45
VRK3-220ENST00000600259 PPP1CAP62136 330 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 UGT8Q16880 541 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 ATP13A4Q4VNC1 1196 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 FHL5Q5TD97 284 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 AGAP9Q5VTM2 703 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 NCBP2-AS2Q69YL0 99 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 PWWP2BQ6NUJ5 590 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 FAM199XQ6PEV8 388 aaPredicted RBP6.01□□□□□ -1.45
VRK3-220ENST00000600259 CERS6Q6ZMG9 384 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 TMC3Q7Z5M5 1100 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 CPNE8Q86YQ8 564 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 NDUFAF2Q8N183 169 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 NIPA2Q8N8Q9 360 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 CPT1CQ8TCG5 803 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 ADAMTS17Q8TE56 1095 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 LRRN4Q8WUT4 740 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 HSPH1Q92598 858 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 RSC1A1Q92681 617 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 TADA1Q96BN2 335 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 ELMO2Q96JJ3 720 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 BTBD6Q96KE9 485 aa6.01□□□□□ -1.45
VRK3-220ENST00000600259 PCMTD1Q96MG8 357 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms