RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	GOLGA6L19	H0YKK7	550 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	KIR2DS3	K7RE56	304 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	MTX2	O75431	263 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	STK17B	O94768	372 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC25A14	O95258	325 aa	Predicted RBP	10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC2A4	P14672	509 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	TYRP1	P17643	537 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	MAN1A1	P33908	653 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	EPHA4	P54764	986 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	KIR2DS5	Q14953	304 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	SEPT7	Q16181	437 aa	Known RBP	10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC18A3	Q16572	532 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	KHDC1	Q4VXA5	237 aa	Known RBP	10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	CEACAM20	Q6UY09	585 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	ADGRG6	Q86SQ4	1221 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	SPATA22	Q8NHS9	363 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	GLYATL1	Q969I3	302 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	KIAA1143	Q96AT1	154 aa	Predicted RBP	10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	IQCD	Q96DY2	449 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	IMP4	Q96G21	291 aa	Known RBP	10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC45A3	Q96JT2	553 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	ADNP	Q9H2P0	1102 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	TRIM39	Q9HCM9	518 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	FBXO8	Q9NRD0	319 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	DNAJC16	Q9Y2G8	782 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	ZNF711	Q9Y462	761 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC30A1	Q9Y6M5	507 aa		10.39	□□□□□ -0.75
LSM4-205	ENST00000597776	MN1	Q10571	1320 aa	Predicted RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	LILRA5	A6NI73	299 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	APOL1	O14791	398 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	AURKA	O14965	403 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	POLR1C	O15160	346 aa	Predicted RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	MTA2	O94776	668 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	KRT1	P04264	644 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TMEM253	P0C7T8	217 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	ZNF28	P17035	718 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	BPI	P17213	487 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	MAP4	P27816	1152 aa	Known RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	OAS2	P29728	719 aa	Known RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	HNRNPH3	P31942	346 aa	Known RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	NOP2	P46087	812 aa	Known RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	CCR10	P46092	362 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	DCDC1	P59894	354 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	DYNLT1	P63172	113 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TLE1	Q04724	770 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	CDC20	Q12834	499 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	NOMO1	Q15155	1222 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	INSC	Q1MX18	579 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	SKIDA1	Q1XH10	827 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	ASTE1	Q2TB18	679 aa	Predicted RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	ATP1A1-AS1	Q5TC04	95 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC9A4	Q6AI14	798 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	NT5DC3	Q86UY8	548 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	PLXDC1	Q8IUK5	500 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TRIM48	Q8IWZ4	208 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TRAM1L1	Q8N609	369 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC35G2	Q8TBE7	412 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TADA1	Q96BN2	335 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	OLFM3	Q96PB7	478 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TGM7	Q96PF1	710 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	ZSCAN5A	Q9BUG6	496 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	GPR63	Q9BZJ6	419 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	XPO4	Q9C0E2	1151 aa	Known RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	MAGEE1	Q9HCI5	957 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	SIDT1	Q9NXL6	827 aa	Known RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TMPRSS11E	Q9UL52	423 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	HYOU1	Q9Y4L1	999 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	TMEM184B	Q9Y519	407 aa	Predicted RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	SPO11	Q9Y5K1	396 aa		10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	MRPS18B	Q9Y676	258 aa	Known RBP	10.38	□□□□□ -0.75
LSM4-205	ENST00000597776	MAST4	O15021	2626 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	OR5K4	A6NMS3	321 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	OR52A4P	A6NMU1	304 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	PDZK1P1	A8MUH7	402 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	ZNF487	B1APH4	448 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	CHUK	O15111	745 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	PMPCB	O75439	489 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	UBXN7	O94888	489 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	DLGAP3	O95886	979 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	MT-CYB	P00156	380 aa	Predicted RBP	10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	VIP	P01282	170 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	TNNT1	P13805	278 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	BRAF	P15056	766 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	ZNF7	P17097	686 aa	Predicted RBP	10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	RPL10	P27635	214 aa	Known RBP	10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	SLC19A1	P41440	591 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	STAT5A	P42229	794 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	LEPR	P48357	1165 aa	Known RBP	10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	SEPHS1	P49903	392 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	CLCNKA	P51800	687 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	DRG2	P55039	364 aa	Known RBP	10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	SH3BP2	P78314	561 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	CDK18	Q07002	472 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	FOXM1	Q08050	763 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	ABHD18	Q0P651	414 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	PDK1	Q15118	436 aa		10.37	□□□□□ -0.75
LSM4-205	ENST00000597776	DEFB109B	Q30KR1	87 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms