RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 TNFRSF10CO14798 259 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 B4GALNT1Q00973 533 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 TMEM115Q12893 351 aaPredicted RBP22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 FASTKD1Q53R41 847 aaKnown RBP22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 NEPROQ6NW34 567 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 DOK6Q6PKX4 331 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 GDAP1Q8TB36 358 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 OR1E3Q8WZA6 343 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 TSACCQ96A04 125 aaPredicted RBP22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 SCARF2Q96GP6 870 aaPredicted RBP22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 ZDHHC5Q9C0B5 715 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 C20orf96Q9NUD7 363 aaPredicted RBP22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 VPS18Q9P253 973 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 PCYT1BQ9Y5K3 369 aaPredicted RBP22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 LRP4O75096 1905 aa22.31■■□□□ 1.16
SNRNP70-204ENST00000595231 IGLV3-16A0A075B6K0 115 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 FAM153BP0C7A2 387 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 ENGP17813 658 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 SSTR1P30872 391 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 GPX6P59796 221 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 CSRP2Q16527 193 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 DBN1Q16643 649 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 ALG11Q2TAA5 492 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 HLA-BQ31612 363 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 FAM153CQ494X1 144 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 ZNF542PQ5EBM4 170 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 TRMT10BQ6PF06 316 aaKnown RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 CCNI2Q6ZMN8 369 aaPredicted RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 LDB1Q86U70 411 aaPredicted RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 PALM2Q8IXS6 379 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 GPR161Q8N6U8 529 aaKnown RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 GPR150Q8NGU9 434 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 PDXPQ96GD0 296 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 OR2AG1Q9H205 316 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 LRRC4CQ9HCJ2 640 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 ZDHHC3Q9NYG2 299 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 MOCS1Q9NZB8 636 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 PRSS38A1L453 326 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 DNAJC6O75061 913 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 ASMTLO95671 621 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 CSF2P04141 144 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 SYPP08247 313 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 SRP54P61011 504 aaKnown RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 FRG1Q14331 258 aaKnown RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 NAA30Q147X3 362 aaPredicted RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 ZNF423Q2M1K9 1284 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 KCNMB4Q86W47 210 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 GSPT2Q8IYD1 628 aaKnown RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 GSDMBQ8TAX9 411 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 CERS2Q96G23 380 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 ELF4Q99607 663 aaPredicted RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 COPS8Q99627 209 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 BOCQ9BWV1 1114 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 KLQ9UEF7 1012 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 DGKBQ9Y6T7 804 aa22.3■■□□□ 1.16
SNRNP70-204ENST00000595231 VEGFDO43915 354 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 ERVK-10P10266 1014 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 NME1P15531 152 aaKnown RBP22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 ZNF8P17098 575 aaPredicted RBP22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 VSNL1P62760 191 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 PPARDQ03181 441 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 SHBQ15464 509 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 HSP90AA5PQ58FG0 334 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 WDR93Q6P2C0 686 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 IL27RAQ6UWB1 636 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 CERS6Q6ZMG9 384 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 CEP128Q6ZU80 1094 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 RASGEF1AQ8N9B8 481 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 OR2I1PQ8NGU4 316 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 TCEAL2Q9H3H9 227 aaPredicted RBP22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 IL21RQ9HBE5 538 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 DNAJC28Q9NX36 388 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 SUFUQ9UMX1 484 aa22.29■■□□□ 1.16
SNRNP70-204ENST00000595231 TDRD6O60522 2096 aaKnown RBP22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 CHUKO15111 745 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 NUAK1O60285 661 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 CDK14O94921 469 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 IVLP07476 585 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 RXRGP48443 463 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 HK3P52790 923 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 KYNUQ16719 465 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 LYPLAL1Q5VWZ2 237 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 CAPN12Q6ZSI9 719 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 C3orf62Q6ZUJ4 267 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 MARK2Q7KZI7 788 aaKnown RBP22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 CILP2Q8IUL8 1156 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 NAT14Q8WUY8 206 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.28■■□□□ 1.165e-7■■■■□ 23.7
SNRNP70-204ENST00000595231 GAREM1Q9H706 876 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 CYP4F12Q9HCS2 524 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 RXFP3Q9NSD7 469 aa22.28■■□□□ 1.16
SNRNP70-204ENST00000595231 RIF1Q5UIP0 2472 aaKnown RBP22.27■■□□□ 1.16
SNRNP70-204ENST00000595231 GPR89AB7ZAQ6 455 aa22.27■■□□□ 1.16
SNRNP70-204ENST00000595231 GPR89BP0CG08 455 aa22.27■■□□□ 1.16
SNRNP70-204ENST00000595231 THOC5Q13769 683 aaKnown RBP22.27■■□□□ 1.16
SNRNP70-204ENST00000595231 TYSND1Q2T9J0 566 aa22.27■■□□□ 1.16
SNRNP70-204ENST00000595231 UBAP2Q5T6F2 1119 aaKnown RBP22.27■■□□□ 1.16
SNRNP70-204ENST00000595231 MRNIPQ6NTE8 343 aa22.27■■□□□ 1.16
SNRNP70-204ENST00000595231 RD3Q7Z3Z2 195 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms