RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 KCNK10P57789 538 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 TGFBIQ15582 683 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 TRIP4Q15650 581 aaPredicted RBP16.37■□□□□ 0.21
LIG1-206ENST00000594067 AARS2Q5JTZ9 985 aaKnown RBP16.37■□□□□ 0.21
LIG1-206ENST00000594067 XKR5Q6UX68 686 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 TMEM26Q6ZUK4 368 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 BORCS5Q969J3 196 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 VPS50Q96JG6 964 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 TMEM74Q96NL1 305 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 C1orf50Q9BV19 199 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 PIF1Q9H611 641 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 SYTL2Q9HCH5 934 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 SLAMF8Q9P0V8 285 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 OAS3Q9Y6K5 1087 aaKnown RBP16.37■□□□□ 0.21
LIG1-206ENST00000594067 CLOCKO15516 846 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 MT-ND1P03886 318 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 CYBBP04839 570 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 UFM1P61960 85 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 LIPEQ05469 1076 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 UGT3A1Q6NUS8 523 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 SYVN1Q86TM6 617 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 TRPV3Q8NET8 790 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 SEPT8Q92599 483 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 C8orf48Q96LL4 319 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 ACOX2Q99424 681 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 GPR21Q99679 349 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 KCTD14Q9BQ13 255 aaPredicted RBP16.37■□□□□ 0.21
LIG1-206ENST00000594067 CCDC68Q9H2F9 335 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 ALG2Q9H553 416 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 POLR1BQ9H9Y6 1135 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 CD320Q9NPF0 282 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.37■□□□□ 0.21
LIG1-206ENST00000594067 TAS2R13Q9NYV9 303 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 BLOC1S6Q9UL45 172 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 PCDHGA4Q9Y5G9 962 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 V9GYQ6 96 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 DOCK4Q8N1I0 1966 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 A0A0D9SEW6 157 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 A0A1W2PP18 115 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 EI24O14681 340 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 RASAL1O95294 804 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 SERPINF2P08697 491 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 PORP16435 677 aaPredicted RBP16.36■□□□□ 0.21
LIG1-206ENST00000594067 OR1G1P47890 313 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 CDKN1CP49918 316 aaPredicted RBP16.36■□□□□ 0.21
LIG1-206ENST00000594067 ARPP19P56211 112 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 RAD51Q06609 339 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 TYSND1Q2T9J0 566 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 NADSYN1Q6IA69 706 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 OFCC1Q8IZS5 231 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 GOLM1Q8NBJ4 401 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 OR4K2Q8NGD2 314 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 TANKQ92844 425 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 COX4I2Q96KJ9 171 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 SLC30A3Q99726 388 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 DERL2Q9GZP9 239 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 ZNF225Q9UK10 706 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 FADS3Q9Y5Q0 445 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 BTN3A1O00481 513 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 PAX3P23760 479 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 ZFP36L2P47974 494 aaKnown RBP16.36■□□□□ 0.21
LIG1-206ENST00000594067 PSMD7P51665 324 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 NANOGP8Q6NSW7 305 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 ZNF598Q86UK7 904 aaKnown RBP16.36■□□□□ 0.21
LIG1-206ENST00000594067 COLGALT2Q8IYK4 626 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 DCBLD1Q8N8Z6 715 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 PEX13Q92968 403 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 PLEKHA8Q96JA3 519 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 EXOC2Q96KP1 924 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 NSMCE3Q96MG7 304 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 TRIM54Q9BYV2 358 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 AIG1Q9NVV5 245 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 SLC27A5Q9Y2P5 690 aa16.36■□□□□ 0.21
LIG1-206ENST00000594067 NDUFS3O75489 264 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 NDST3O95803 873 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 RPS17P08708 135 aaKnown RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 C7P10643 843 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 FOXM1Q08050 763 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 TAF10Q12962 218 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 RBBP7Q16576 425 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 NFE2Q16621 373 aaPredicted RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 CYBRD1Q53TN4 286 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 ABRAXAS1Q6UWZ7 409 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 FUBP1Q96AE4 644 aaKnown RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 RMDN1Q96DB5 314 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 B3GALT6Q96L58 329 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 ZNF599Q96NL3 588 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 SOX17Q9H6I2 414 aaPredicted RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 FNDC3AQ9Y2H6 1198 aaKnown RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 PCDHB5Q9Y5E4 795 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 TCRBV5S2A0A599 114 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 LCHNA4D1U4 455 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 TMEM221A6NGB7 291 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 VPS4BO75351 444 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 OAZ2O95190 189 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 EPOP01588 193 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 IGHA2P01877 340 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 GPIP06744 558 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 MAGEA10P43363 369 aaPredicted RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 RGRP47804 291 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms