RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 H2AFZP0C0S5 128 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 CLCNKAP51800 687 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 IFI35P80217 286 aaPredicted RBP22.36■■□□□ 1.17
SSBP4-203ENST00000593641 ZBTB17Q13105 803 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 INSCQ1MX18 579 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 CRTC3Q6UUV7 619 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 H2AFVQ71UI9 128 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 LUZP1Q86V48 1076 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 ESX1Q8N693 406 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.36■■□□□ 1.17
SSBP4-203ENST00000593641 CBX8Q9HC52 389 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 TRIM39Q9HCM9 518 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 RAD18Q9NS91 495 aa22.36■■□□□ 1.17
SSBP4-203ENST00000593641 VIPP01282 170 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 GYPCP04921 128 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 ANKRD34CP0C6C1 535 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 KDELR1P24390 212 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 DCDC1P59894 354 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 UBE2IP63279 158 aaKnown RBP22.35■■□□□ 1.17
SSBP4-203ENST00000593641 AP1B1Q10567 949 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 PDPK2PQ6A1A2 396 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 TIPARPQ7Z3E1 657 aaKnown RBP22.35■■□□□ 1.17
SSBP4-203ENST00000593641 C9orf43Q8TAL5 461 aaPredicted RBP22.35■■□□□ 1.17
SSBP4-203ENST00000593641 STARD8Q92502 1023 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 RNF157Q96PX1 679 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 PLEKHG4BQ96PX9 1271 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 UCK1Q9HA47 277 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 SHOC2Q9UQ13 582 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 HEY1Q9Y5J3 304 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 ADGRG1Q9Y653 693 aa22.35■■□□□ 1.17
SSBP4-203ENST00000593641 FLNCQ14315 2725 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 LRRD1A4D1F6 860 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 PDZK1P1A8MUH7 402 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 AMD1P17707 334 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 FOXM1Q08050 763 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 MAP7Q14244 749 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 PLA2G4EQ3MJ16 856 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 ZNF648Q5T619 568 aaPredicted RBP22.34■■□□□ 1.17
SSBP4-203ENST00000593641 TMEM26Q6ZUK4 368 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 TRAM1L1Q8N609 369 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 CNTD1Q8N815 330 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 RAPGEF5Q92565 580 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 GLYATL1Q969I3 302 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 EID2BQ96D98 161 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 C9orf72Q96LT7 481 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 MAGEE1Q9HCI5 957 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 NFKBIL1Q9UBC1 381 aaPredicted RBP22.34■■□□□ 1.17
SSBP4-203ENST00000593641 ANAPC2Q9UJX6 822 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 NENFQ9UMX5 172 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 ZNF711Q9Y462 761 aa22.34■■□□□ 1.17
SSBP4-203ENST00000593641 GOLGA6L19H0YKK7 550 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 KMOO15229 486 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 UBXN7O94888 489 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 DLGAP3O95886 979 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 PIRTP0C851 137 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 TYRP1P17643 537 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 XRCC1P18887 633 aaPredicted RBP22.33■■□□□ 1.17
SSBP4-203ENST00000593641 TCN2P20062 427 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 OAS2P29728 719 aaKnown RBP22.33■■□□□ 1.17
SSBP4-203ENST00000593641 GFERP55789 205 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 SEPT7Q16181 437 aaKnown RBP22.33■■□□□ 1.17
SSBP4-203ENST00000593641 PCSK7Q16549 785 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 SKIDA1Q1XH10 827 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 ADGRG6Q86SQ4 1221 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 NT5DC3Q86UY8 548 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 LRRTM4Q86VH4 590 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 PLD5Q8N7P1 536 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 GPR26Q8NDV2 337 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 APOBEC4Q8WW27 367 aaKnown RBP22.33■■□□□ 1.17
SSBP4-203ENST00000593641 AGAP3Q96P47 875 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 MAK16Q9BXY0 300 aaKnown RBP22.33■■□□□ 1.17
SSBP4-203ENST00000593641 CEP41Q9BYV8 373 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 GPR63Q9BZJ6 419 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 ULBP3Q9BZM4 244 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 EPN3Q9H201 632 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 SIDT1Q9NXL6 827 aaKnown RBP22.33■■□□□ 1.17
SSBP4-203ENST00000593641 DNAJC16Q9Y2G8 782 aa22.33■■□□□ 1.17
SSBP4-203ENST00000593641 LRRK2Q5S007 2527 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 CYSRT1A8MQ03 144 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 PPP1R12AO14974 1030 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-203ENST00000593641 CHUKO15111 745 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 C9P02748 559 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 CASP14P31944 242 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 STAT5AP42229 794 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 SEPT6Q14141 434 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 MESDQ14696 234 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 PDK1Q15118 436 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 SLC18A3Q16572 532 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 DEFB109BQ30KR1 87 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 CRTC2Q53ET0 693 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-203ENST00000593641 C16orf46Q6P387 395 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 TMC3Q7Z5M5 1100 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 IMP4Q96G21 291 aaKnown RBP22.32■■□□□ 1.16
SSBP4-203ENST00000593641 TGM7Q96PF1 710 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 TRIB3Q96RU7 358 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 TIMM29Q9BSF4 260 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 PACSIN1Q9BY11 444 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 DEF6Q9H4E7 631 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 ZNF71Q9NQZ8 489 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-203ENST00000593641 POT1Q9NUX5 634 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms