RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 ROR2Q01974 943 aaKnown RBP4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 UBE3AQ05086 875 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 BIRC3Q13489 604 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 GPNMBQ14956 572 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 NONOQ15233 471 aaKnown RBP eCLIP4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 TAF7Q15545 349 aaPredicted RBP4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 TAF12Q16514 161 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 ZNF284Q2VY69 593 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 FNBP1LQ5T0N5 605 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 UBAP2Q5T6F2 1119 aaKnown RBP4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 ATG16L1Q676U5 607 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 ZNF367Q7RTV3 350 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 LRRTM4Q86VH4 590 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 PALB2Q86YC2 1186 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 ZDHHC23Q8IYP9 409 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 FBXL14Q8N1E6 418 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 PRR26Q8N8Z3 221 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 SLC35F5Q8WV83 523 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 HSPH1Q92598 858 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 P2RX5Q93086 422 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 MPHOSPH8Q99549 860 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 CLSTN3Q9BQT9 956 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 EDEM2Q9BV94 578 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 TRIM4Q9C037 500 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 DCLK3Q9C098 648 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 SLC32A1Q9H598 525 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 WDR6Q9NNW5 1121 aaKnown RBP4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 ENTPD7Q9NQZ7 604 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 ALKBH4Q9NXW9 302 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 FZD10Q9ULW2 581 aa4.84□□□□□ -1.63
CCDC58P3-201ENST00000590792 NBPF19A0A087WUL8 3843 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 FN1P02751 2386 aaKnown RBP4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 NID2Q14112 1375 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 IGKV2D-30A0A075B6S6 120 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 OR6C75A6NL08 312 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 C4orf47A7E2U8 309 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 FAM157AC9JC47 383 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MS4A18H0YCH9 400 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 PER2O15055 1255 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 TSPAN3O60637 253 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 SERPINC1P01008 464 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MMP3P08254 477 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 ENO3P13929 434 aaPredicted RBP4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 HSD3B1P14060 373 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 ADSSP30520 456 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 CCR5P51681 352 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 ARSFP54793 590 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 STARD6P59095 220 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 HNF4GQ14541 408 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 NAA25Q14CX7 972 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 TCTN1Q2MV58 587 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 DNTTIP2Q5QJE6 756 aaKnown RBP4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 ATG9BQ674R7 924 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 TRILQ7L0X0 811 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 LRRC8DQ7L1W4 858 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MCM10Q7L590 875 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 TICAM1Q8IUC6 712 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 CHCHD4Q8N4Q1 142 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MIGA1Q8NAN2 632 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MYRIPQ8NFW9 859 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 OR4N2Q8NGD1 307 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 RAB40AQ8WXH6 277 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 CNOT9Q92600 299 aaKnown RBP4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 TMEM18Q96B42 140 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 ZNF479Q96JC4 524 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 LYZL4Q96KX0 146 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MARK4Q96L34 752 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 UBXN10Q96LJ8 280 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 SPATC1LQ9H0A9 340 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 HIF1ANQ9NWT6 349 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 RRN3Q9NYV6 651 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 PCDHA7Q9UN72 937 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 CLDN16Q9Y5I7 305 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MYH3P11055 1940 aa4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 USP9YO00507 2555 aaPredicted RBP4.83□□□□□ -1.64
CCDC58P3-201ENST00000590792 MTORP42345 2549 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 ZNFX1Q9P2E3 1918 aaKnown RBP4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 A0A096LPK6 155 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 LACTBL1A8MY62 500 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 EYA2O00167 538 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 CEP104O60308 925 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 SNAI1O95863 264 aaPredicted RBP4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 NGFRP08138 427 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 CHRM4P08173 479 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 ASNSP08243 561 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 EIF2S2P20042 333 aaKnown RBP4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 DNAJB1P25685 340 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 CCT5P48643 541 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 PCYT1AP49585 367 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 ABATP80404 500 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 SLC18A2Q05940 514 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 TBL3Q12788 808 aaKnown RBP4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 KCNC3Q14003 757 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 ZRSR2Q15696 482 aaKnown RBP4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 FSCBQ5H9T9 825 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 DCLRE1AQ6PJP8 1040 aa4.82□□□□□ -1.64
CCDC58P3-201ENST00000590792 BBS12Q6ZW61 710 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms