RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 ASB8Q9H765 288 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 EBF2Q9HAK2 575 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 ZBTB26Q9HCK0 441 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 RAD18Q9NS91 495 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 KLHL42Q9P2K6 505 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 STOML1Q9UBI4 398 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 CRLS1Q9UJA2 301 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 MED16Q9Y2X0 877 aa11.17□□□□□ -0.62
LIG3-204ENST00000585740 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 NEDD8-MDP1E9PL57 170 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 BTN3A1O00481 513 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 AZIN1O14977 448 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 NIPSNAP2O75323 286 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 FKBP6O75344 327 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 ECI2O75521 394 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 RFPL2O75678 378 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 PSMG1O95456 288 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 MLYCDO95822 493 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 S100BP04271 92 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 ASLP04424 464 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 CYP2A6P11509 494 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 TYRP14679 529 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 POLR2EP19388 210 aaKnown RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 ITGAXP20702 1163 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 ACRV1P26436 265 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 GCKP35557 465 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 NNMTP40261 264 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 CCNHP51946 323 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 LCP2Q13094 533 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 NFATC2Q13469 925 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 KPNB1Q14974 876 aaKnown RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 E2F5Q15329 346 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 TSNQ15631 228 aaKnown RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 CCDC6Q16204 474 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 PFKFB4Q16877 469 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 TTLL9Q3SXZ7 439 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 ACCSLQ4AC99 568 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 FAM151BQ6UXP7 276 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 MACC1Q6ZN28 852 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 ADAMTSL2Q86TH1 951 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 GPSM1Q86YR5 675 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 PELI3Q8N2H9 469 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 KYQ8NBH2 561 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 OR6K2Q8NGY2 324 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 JADE3Q92613 823 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 MOCOSQ96EN8 888 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 LINGO1Q96FE5 620 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 ASIC4Q96FT7 647 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 CATSPER2Q96P56 530 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 LENG8Q96PV6 779 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 MCCC1Q96RQ3 725 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 GAS2L1Q99501 681 aaPredicted RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 CCT7Q99832 543 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 C17orf80Q9BSJ5 609 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 ACSS2Q9NR19 701 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 BCAP29Q9UHQ4 241 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 ANGPTL2Q9UKU9 493 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 CCL26Q9Y258 94 aa11.16□□□□□ -0.62
LIG3-204ENST00000585740 TNPO3Q9Y5L0 923 aaKnown RBP11.16□□□□□ -0.62
LIG3-204ENST00000585740 PIKFYVEQ9Y2I7 2098 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 A0A088AWK7 358 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 LOC100653049A0A140TA62 436 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 NPEPPSL1A6NEC2 478 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 MEI4A8MW99 385 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 EIF3FO00303 357 aaPredicted RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 GAPDHSO14556 408 aaPredicted RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 GIPC1O14908 333 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 UBDO15205 165 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 OR1I1O60431 355 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 ENTPD5O75356 428 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 SKAP2O75563 359 aaPredicted RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 CRCPO75575 148 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 KRT34O76011 436 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 CLDN7O95471 211 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 PRAMEF12O95522 483 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 ANP32DO95626 131 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 TSPAN12O95859 305 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 CHEK2O96017 543 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 SRPRAP08240 638 aaKnown RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 EPCAMP16422 314 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 ZNF30P17039 623 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 BPIP17213 487 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 DGKAP23743 735 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 EEF1DP29692 281 aaKnown RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 CTSOP43234 321 aaPredicted RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 STK19P49842 368 aaPredicted RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 CLCN7P51798 805 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 ACTR3P61158 418 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 STX1BP61266 288 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 SLC25A3Q00325 362 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 CLCQ05315 142 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 STX5Q13190 355 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 CCDC85BQ15834 202 aaPredicted RBP11.15□□□□□ -0.62
LIG3-204ENST00000585740 ACSBG2Q5FVE4 666 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 C1orf146Q5VVC0 180 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 KANK2Q63ZY3 851 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 PGM2L1Q6PCE3 622 aa11.15□□□□□ -0.62
LIG3-204ENST00000585740 AAGABQ6PD74 315 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms